C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nerve growth factor receptor (TNFRSF16) associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372645 NGFRAP1-001 ENSG00000166681 9606 + X:103376395-103378077 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000372645
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000372645 6.515±0.00 9.915±0.00 2.798±0.00 52.895±21.50 6.160±3.82 4.494±3.61 9.827±0.00 18.960±14.94 3.903±0.49 9.763±7.22 27.253±25.84 37.800±3.37 21.573±14.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000726 CIL_000726_0001 CGP X:103356445-103378077

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005123 IEA death receptor binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006919 TAS activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0007275 TAS multicellular organismal development
GO:0008625 IEA extrinsic apoptotic signaling pathway via death domain receptors
GO:0008656 TAS cysteine-type endopeptidase activator activity involved in apoptotic process
GO:0043281 TAS regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0046872 IEA metal ion binding
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0097190 TAS apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178632 Ngfrap1-201 protein_coding Mus_musculus 0 448
ENSMUST00000113113 Ngfrap1-003 protein_coding Mus_musculus 0 448
ENSMUST00000113112 Ngfrap1-002 protein_coding Mus_musculus 0 448
ENSMUST00000053540 Ngfrap1-001 protein_coding Mus_musculus 0 448

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