C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription elongation factor A (SII)-like 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372680 TCEAL5-001 ENSG00000204065 9606 - X:103273691-103276872 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000372680
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000372680 0.154±0.00 0.028±0.00 26.042±23.81 0.445±0.00 0.981±0.00 0.033±0.00 0.029±0.00 0.224±0.12 2.290±1.98 0.046±0.04 24.083±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072A CIL_00072A_0001 CGP X:103252995-103276872
CIL_000729 CIL_000729_0001 CGP X:103273691-103311046

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066819 Tceal5-001 protein_coding Mus_musculus 0 756
ENSMUST00000033783 Tceal6-001 protein_coding Mus_musculus 0 593
ENSMUST00000113100 Tceal3-006 protein_coding Mus_musculus 0 555
ENSMUST00000060904 Tceal3-001 protein_coding Mus_musculus 0 555
ENSMUST00000128040 Tceal3-007 protein_coding Mus_musculus 0 385
ENSMUST00000151592 Tceal5-003 protein_coding Mus_musculus 3e-28 130
ENSMUST00000131510 Tceal5-002 protein_coding Mus_musculus 1e-27 128

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