C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lipin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373257 LPIN3-001 ENSG00000132793 9606 + 20:41340920-41360582 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartLiverLungOvaryPlacentaTestisENST00000373257
Transcript ID Adipose Brain Breast Heart Liver Lung Ovary Placenta Testis
ENST00000373257 1.154±0.00 0.082±0.00 1.161±0.68 1.192±0.00 0.212±0.00 0.362±0.11 3.322±1.54 0.643±0.00 1.439±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004E6 CIL_0004E6_0001 CGP 20:41178448-41360582
CIL_0004E9 CIL_0004E9_0001 CGP 20:41340920-41366827

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006631 IEA fatty acid metabolic process
GO:0006644 TAS phospholipid metabolic process
GO:0006646 TAS phosphatidylethanolamine biosynthetic process
GO:0006656 TAS phosphatidylcholine biosynthetic process
GO:0008195 IEA phosphatidate phosphatase activity
GO:0016311 IEA dephosphorylation
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040872 Lpin3-002 protein_coding Mus_musculus 0 2213
ENSMUST00000109456 Lpin3-004 protein_coding Mus_musculus 0 2213
ENSMUST00000109457 Lpin3-005 protein_coding Mus_musculus 0 2102
ENSMUST00000109455 Lpin3-001 protein_coding Mus_musculus 0 1057
ENSMUST00000124920 Lpin3-003 processed_transcript Mus_musculus 0 431

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