C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T-box 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373291 TBX22-002 ENSG00000122145 9606 + X:80023069-80031769 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000373291
Transcript ID Ovary Testis
ENST00000373291 0.013±0.00 0.758±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KD CIL_0003KD_0001 CGP X:79360384-80031769

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IDA DNA binding
GO:0003700 TAS:IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA:IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 TAS:IEA regulation of transcription, DNA-templated
GO:0007275 TAS multicellular organismal development
GO:0045892 IDA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118986 Tbx22-002 protein_coding Mus_musculus 0 1094
ENSMUST00000168174 Tbx22-001 protein_coding Mus_musculus 0 1094
ENSMUST00000168403 Tbx22-004 protein_coding Mus_musculus 0 785
ENSMUST00000068451 Tbx22-003 protein_coding Mus_musculus 0 785
ENSMUST00000172682 Tbx22-005 nonsense_mediated_decay Mus_musculus 0 344

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