C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: platelet-activating factor acetylhydrolase 2, 40kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374284 PAFAH2-004 ENSG00000158006 9606 - 1:25960770-25998044 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000374284
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000374284 0.282±0.00 1.039±0.00 0.475±0.00 0.575±0.08 0.750±0.00 0.238±0.00 1.943±0.00 0.969±0.00 0.784±0.45 0.474±0.00 1.371±0.65

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003847 IEA 1-alkyl-2-acetylglycerophosphocholine esterase activity
GO:0005543 TAS phospholipid binding
GO:0005737 IEA cytoplasm
GO:0006508 IEA proteolysis
GO:0006629 TAS lipid metabolic process
GO:0008236 IEA serine-type peptidase activity
GO:0016042 IEA lipid catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105870 Pafah2-001 protein_coding Mus_musculus 0 983
ENSMUST00000105869 Pafah2-002 protein_coding Mus_musculus 0 983
ENSMUST00000145626 Pafah2-007 processed_transcript Mus_musculus 0 593
ENSMUST00000155852 Tsga10-005 retained_intron Mus_musculus 0.00005 55
ENSMUST00000123082 Tsga10-006 retained_intron Mus_musculus 0.00005 55
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.00005 55

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