C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: testis specific 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123082 Tsga10-006 ENSMUSG00000060771 10090 - 1:37832406-37864836 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000123082
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000123082 0.613±0.12 0.269±0.17 1.253±0.36 2.244±1.54 0.261±0.13 0.343±0.17 0.372±0.08 0.243±0.10 0.833±0.42 0.861±0.26 0.616±0.22 1.709±1.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034C CIL_00034C_0002 CGP 1:37611677-37865298

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355053 TSGA10-002 protein_coding Homo_sapiens 0 610
ENST00000374282 PAFAH2-001 protein_coding Homo_sapiens 0.00007 55
ENST00000374284 PAFAH2-004 protein_coding Homo_sapiens 0.00005 55
ENST00000393482 TSGA10-003 protein_coding Homo_sapiens 0 756
ENST00000393483 TSGA10-001 protein_coding Homo_sapiens 0 610
ENST00000409564 TSGA10-005 protein_coding Homo_sapiens 0 1206
ENST00000410001 TSGA10-007 protein_coding Homo_sapiens 0 1040
ENST00000462782 TSGA10-012 retained_intron Homo_sapiens 0 259
ENST00000471174 TSGA10-010 processed_transcript Homo_sapiens 0 433
ENST00000476849 TSGA10-009 processed_transcript Homo_sapiens 0 462
ENST00000478090 TSGA10-006 processed_transcript Homo_sapiens 0 1179
ENST00000488960 TSGA10-015 processed_transcript Homo_sapiens 0 224
ENST00000489926 TSGA10-014 processed_transcript Homo_sapiens 0 540
ENST00000494483 TSGA10-011 processed_transcript Homo_sapiens 0 289
ENST00000497915 TSGA10-013 processed_transcript Homo_sapiens 0 667

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