C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374656 RING1-001 ENSG00000204227 9606 + 6:33208495-33212722 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374656
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374656 19.588±0.00 32.226±0.00 0.256±0.00 11.263±10.09 13.896±12.88 9.351±8.97 6.930±6.23 12.950±10.02 8.083±6.54 16.061±15.04 10.782±7.69 34.015±31.19 20.910±7.08 30.846±6.33

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IEA ubiquitin ligase complex
GO:0001739 IEA sex chromatin
GO:0003682 IEA chromatin binding
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0009952 IEA anterior/posterior pattern specification
GO:0016574 IEA histone ubiquitination
GO:0016604 IEA nuclear body
GO:0016874 IEA ligase activity
GO:0031519 IDA PcG protein complex
GO:0035102 IDA PRC1 complex
GO:0035518 IDA histone H2A monoubiquitination
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0048593 IEA camera-type eye morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025183 Ring1-001 protein_coding Mus_musculus 0 1618
ENSMUST00000174054 Ring1-002 retained_intron Mus_musculus 0 488
ENSMUST00000172739 Ring1-003 retained_intron Mus_musculus 6.00036e-42 176

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