C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025183 Ring1-001 ENSMUSG00000024325 10090 - 17:34020792-34024680 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025183
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025183 14.131±2.11 16.683±2.23 15.104±3.62 10.776±4.66 4.869±1.81 10.052±3.28 5.203±0.96 9.357±2.41 5.894±1.92 6.957±1.59 5.594±0.36 14.767±6.23 4.101±0.74 8.018±3.91

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IDA ubiquitin ligase complex
GO:0001739 IDA sex chromatin
GO:0003682 IDA chromatin binding
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0009952 IMP anterior/posterior pattern specification
GO:0016574 IGI histone ubiquitination
GO:0016604 IDA nuclear body
GO:0016874 IEA ligase activity
GO:0031519 IDA PcG protein complex
GO:0035102 IEA PRC1 complex
GO:0035518 IEA histone H2A monoubiquitination
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0048593 IGI camera-type eye morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000017034 rnf2-201 protein_coding Danio_rerio 0 255
ENSDART00000154645 rnf2-002 protein_coding Danio_rerio 2e-32 145
ENST00000374656 RING1-001 protein_coding Homo_sapiens 0 1618
ENST00000383212 RING1-001 protein_coding Homo_sapiens 0 1618
ENST00000415941 RING1-001 protein_coding Homo_sapiens 0 1615
ENST00000427374 RING1-001 protein_coding Homo_sapiens 0 1618
ENST00000430233 RING1-001 protein_coding Homo_sapiens 0 1618
ENST00000436128 RING1-001 protein_coding Homo_sapiens 0 1618
ENST00000472412 RING1-002 processed_transcript Homo_sapiens 0 1443
ENST00000478431 RING1-002 processed_transcript Homo_sapiens 0 1443
ENST00000479405 RING1-002 processed_transcript Homo_sapiens 0 1443
ENST00000482708 RING1-002 processed_transcript Homo_sapiens 0 1443
ENST00000484884 RING1-002 processed_transcript Homo_sapiens 0 1443
ENST00000498835 RING1-002 processed_transcript Homo_sapiens 0 1443

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