C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan anchor biosynthesis, class U
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374820 PIGU-201 ENSG00000101464 9606 - 20:34560866-34677085 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungOvaryTestisENST00000374820
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Ovary Testis
ENST00000374820 1.173±0.00 3.223±0.41 4.730±0.00 2.179±0.00 3.391±0.00 3.930±0.00 2.253±0.00 7.791±0.00 2.355±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098F CIL_00098F_0001 VISTA 20:33968769-34569610
CIL_0005BD CIL_0005BD_0001 CGP 20:34546854-34677090

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003923 IMP GPI-anchor transamidase activity
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005886 IDA plasma membrane
GO:0006501 TAS C-terminal protein lipidation
GO:0006506 IDA:IEA GPI anchor biosynthetic process
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016255 TAS attachment of GPI anchor to protein
GO:0030176 IC integral component of endoplasmic reticulum membrane
GO:0034235 IMP GPI anchor binding
GO:0042765 IDA GPI-anchor transamidase complex
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046425 IDA regulation of JAK-STAT cascade

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077626 Pigu-001 protein_coding Mus_musculus 0 1459
ENSMUST00000165234 Pigu-201 protein_coding Mus_musculus 0 1441
ENSMUST00000139854 Pigu-003 processed_transcript Mus_musculus 0 453
ENSMUST00000124419 Pigu-002 retained_intron Mus_musculus 0 285

Loading