C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: melanoma antigen family D, 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375058 MAGED2-003 ENSG00000102316 9606 + X:54808371-54816007 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000375058
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000375058 11.783±0.00 15.150±0.00 11.762±7.48 16.496±0.00 10.824±0.00 6.109±0.00 11.510±6.74 5.645±3.10 30.386±0.00 101.354±14.04 122.189±5.95 10.821±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112700 Maged2-002 protein_coding Mus_musculus 0 2290
ENSMUST00000112699 Maged2-001 protein_coding Mus_musculus 0 2228
ENSMUST00000026302 Maged2-011 protein_coding Mus_musculus 0 2128
ENSMUST00000112697 Maged2-201 protein_coding Mus_musculus 0 2106
ENSMUST00000145342 Maged2-004 retained_intron Mus_musculus 0 1458
ENSMUST00000143843 Maged2-006 protein_coding Mus_musculus 0 881
ENSMUST00000129768 Maged2-005 protein_coding Mus_musculus 0 586
ENSMUST00000112709 Tro-201 protein_coding Mus_musculus 0 577
ENSMUST00000163450 Tro-003 nonsense_mediated_decay Mus_musculus 0 577
ENSMUST00000087253 Tro-002 protein_coding Mus_musculus 0 577
ENSMUST00000087258 Tro-001 protein_coding Mus_musculus 0 577
ENSMUST00000124537 Maged2-009 processed_transcript Mus_musculus 0 573
ENSMUST00000164071 Tro-004 protein_coding Mus_musculus 0 568
ENSMUST00000151403 Tro-005 protein_coding Mus_musculus 0 568
ENSMUST00000163969 Tro-006 protein_coding Mus_musculus 0 497
ENSMUST00000147152 Maged2-008 protein_coding Mus_musculus 0 494
ENSMUST00000131241 Maged2-007 protein_coding Mus_musculus 0 477
ENSMUST00000169450 Tro-008 retained_intron Mus_musculus 0 388
ENSMUST00000171775 Tro-007 retained_intron Mus_musculus 3e-31 141
ENSMUST00000165192 Tro-009 retained_intron Mus_musculus 0.0000000001 73

Loading