C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trophinin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112709 Tro-201 ENSMUSG00000025272 10090 - X:150645304-150657436 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000112709
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112709 3.594±0.43 0.273±0.00 21.991±2.06 0.108±0.00 0.281±0.00 0.221±0.13 0.318±0.17 0.364±0.09 0.009±0.01 1.495±0.82 2.201±1.08 0.603±0.28

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0030308 IDA negative regulation of cell growth

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000173898 TRO-008 protein_coding Homo_sapiens 0 1550
ENST00000218439 MAGED2-201 protein_coding Homo_sapiens 0 577
ENST00000319167 TRO-017 protein_coding Homo_sapiens 0 1253
ENST00000347546 MAGED2-004 protein_coding Homo_sapiens 0 577
ENST00000375022 TRO-010 protein_coding Homo_sapiens 0 1253
ENST00000375041 TRO-009 protein_coding Homo_sapiens 0 1288
ENST00000375053 MAGED2-202 protein_coding Homo_sapiens 0 577
ENST00000375058 MAGED2-003 protein_coding Homo_sapiens 0 577
ENST00000375060 MAGED2-005 protein_coding Homo_sapiens 0 577
ENST00000375068 MAGED2-002 protein_coding Homo_sapiens 0 577
ENST00000396224 MAGED2-203 protein_coding Homo_sapiens 0 577
ENST00000399736 TRO-011 protein_coding Homo_sapiens 0 990
ENST00000420798 TRO-201 protein_coding Homo_sapiens 0 1288
ENST00000445561 TRO-001 nonsense_mediated_decay Homo_sapiens 0 1253
ENST00000469211 TRO-023 retained_intron Homo_sapiens 0 558
ENST00000484031 TRO-020 processed_transcript Homo_sapiens 0 416
ENST00000487463 MAGED2-006 processed_transcript Homo_sapiens 0 195
ENST00000487482 MAGED2-008 processed_transcript Homo_sapiens 0 239
ENST00000492142 TRO-005 processed_transcript Homo_sapiens 0 568
ENST00000492706 TRO-003 retained_intron Homo_sapiens 0 641
ENST00000622017 TRO-202 protein_coding Homo_sapiens 0 983

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