C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: melanoma antigen family D, 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375068 MAGED2-002 ENSG00000102316 9606 + X:54807599-54816007 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLiverLungOvaryPlacentaENST00000375068
Transcript ID Brain Breast Heart Liver Lung Ovary Placenta
ENST00000375068 5.830±0.00 3.738±0.00 3.394±0.00 3.560±0.00 1.941±0.00 18.370±8.43 31.673±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112699 Maged2-001 protein_coding Mus_musculus 0 2359
ENSMUST00000112700 Maged2-002 protein_coding Mus_musculus 0 2228
ENSMUST00000026302 Maged2-011 protein_coding Mus_musculus 0 2139
ENSMUST00000112697 Maged2-201 protein_coding Mus_musculus 0 2106
ENSMUST00000145342 Maged2-004 retained_intron Mus_musculus 0 1458
ENSMUST00000143843 Maged2-006 protein_coding Mus_musculus 0 881
ENSMUST00000129768 Maged2-005 protein_coding Mus_musculus 0 586
ENSMUST00000112709 Tro-201 protein_coding Mus_musculus 0 577
ENSMUST00000163450 Tro-003 nonsense_mediated_decay Mus_musculus 0 577
ENSMUST00000087253 Tro-002 protein_coding Mus_musculus 0 577
ENSMUST00000087258 Tro-001 protein_coding Mus_musculus 0 577
ENSMUST00000124537 Maged2-009 processed_transcript Mus_musculus 0 573
ENSMUST00000164071 Tro-004 protein_coding Mus_musculus 0 568
ENSMUST00000151403 Tro-005 protein_coding Mus_musculus 0 568
ENSMUST00000163969 Tro-006 protein_coding Mus_musculus 0 497
ENSMUST00000147152 Maged2-008 protein_coding Mus_musculus 0 494
ENSMUST00000131241 Maged2-007 protein_coding Mus_musculus 0 477
ENSMUST00000169450 Tro-008 retained_intron Mus_musculus 0 388
ENSMUST00000171775 Tro-007 retained_intron Mus_musculus 3e-31 141
ENSMUST00000165192 Tro-009 retained_intron Mus_musculus 0.0000000001 73

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