C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hyaluronan binding protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375249 HABP4-001 ENSG00000130956 9606 + 9:96450205-96491336 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375249
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375249 13.138±0.00 6.826±0.00 2.445±0.00 24.885±21.35 10.038±0.00 7.026±5.89 4.301±3.04 10.747±0.00 2.894±0.73 4.676±3.49 2.317±1.63 4.346±2.62 3.756±1.37 30.767±8.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Z5 CIL_0008Z5_0001 VISTA 9:96215463-96816013
CIL_0002J9 CIL_0002J9_0001 CGP 9:96385941-96491336
CIL_0002JC CIL_0002JC_0001 CGP 9:96450201-96619830

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002576 TAS platelet degranulation
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005829 TAS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007596 TAS blood coagulation
GO:0030017 ISS sarcomere
GO:0030168 TAS platelet activation
GO:0043392 IDA negative regulation of DNA binding
GO:0071260 ISS cellular response to mechanical stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021929 Habp4-201 protein_coding Mus_musculus 0 1358

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