C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of chromosome condensation 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375436 RCC2-001 ENSG00000179051 9606 - 1:17406760-17439724 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375436
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375436 0.535±0.00 0.837±0.00 5.509±2.26 3.660±1.47 0.953±0.13 11.094±0.00 1.113±0.70 3.859±0.00 1.051±0.00 11.011±0.00 6.351±1.54 2.697±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000236 CIL_000236_0002 CGP 1:17406760-17697874

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0005874 IEA microtubule
GO:0007032 IEA endosome organization
GO:0007067 IEA mitotic nuclear division
GO:0007229 IDA integrin-mediated signaling pathway
GO:0008017 IMP microtubule binding
GO:0010971 IMP positive regulation of G2/M transition of mitotic cell cycle
GO:0030334 ISS regulation of cell migration
GO:0030496 IDA midbody
GO:0034260 ISS negative regulation of GTPase activity
GO:0034506 IDA chromosome, centromeric core domain
GO:0044822 IDA poly(A) RNA binding
GO:0048041 IDA focal adhesion assembly
GO:0048365 IPI Rac GTPase binding
GO:0051895 ISS negative regulation of focal adhesion assembly
GO:0051987 IMP positive regulation of attachment of spindle microtubules to kinetochore
GO:0072356 IMP chromosome passenger complex localization to kinetochore
GO:1900025 ISS negative regulation of substrate adhesion-dependent cell spreading
GO:1990023 IDA mitotic spindle midzone

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038893 Rcc2-201 protein_coding Mus_musculus 0 2121
ENSMUST00000071169 Rcc2-001 protein_coding Mus_musculus 0 2071
ENSMUST00000138808 Rcc2-002 protein_coding Mus_musculus 0 867
ENSMUST00000138682 Rcc2-003 processed_transcript Mus_musculus 0 418
ENSMUST00000129838 Rcc2-004 processed_transcript Mus_musculus 0 303

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