C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: iron-sulfur cluster assembly 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375991 ISCA1-001 ENSG00000135070 9606 - 9:86264546-86282529 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375991
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375991 9.083±0.00 10.533±0.00 2.963±0.00 19.624±0.79 11.208±7.04 7.176±3.39 16.570±10.85 20.617±0.00 7.988±1.08 4.960±2.14 5.708±1.24 10.043±6.15 12.859±3.62 10.306±2.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007D CIL_00007D_0002 CGP 9:86264546-86354454

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005739 IEA mitochondrion
GO:0016226 IEA iron-sulfur cluster assembly
GO:0046872 IEA metal ion binding
GO:0051536 IEA iron-sulfur cluster binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057115 Isca1-001 protein_coding Mus_musculus 0 488
ENSMUST00000104942 AK157302-001 protein_coding Mus_musculus 0 483
ENSMUST00000041159 AK157302-201 processed_pseudogene Mus_musculus 0 438
ENSMUST00000160628 Isca1-002 retained_intron Mus_musculus 4.06377e-44 183

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