C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00007D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000051956-ENSDARG00000074645 CGP 7955 5:72291341-72345969
GeneTranscriptPositionBiotype
ENSDARG00000051956 (isca1)
iron-sulfur cluster assembly 1
ENSDART00000073676 (isca1-201) 72291341-72299355 protein_coding
ENSDARG00000074645 (ZCCHC6)
zinc finger, CCHC domain containing 6
ENSDART00000109487 (ZCCHC6-201) 72319405-72345969 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00007D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135070-ENSG00000083223 CGP 9606 9:86264546-86354454
GeneTranscriptPositionBiotype
ENSG00000083223 (ZCCHC6)
zinc finger, CCHC domain containing 6
ENST00000277141 (ZCCHC6-003) 86287733-86354410 protein_coding
ENST00000375947 (ZCCHC6-006) 86344870-86352706 protein_coding
ENST00000375948 (ZCCHC6-005) 86336879-86343123 protein_coding
ENST00000375957 (ZCCHC6-002) 86287735-86319644 protein_coding
ENST00000375960 (ZCCHC6-004) 86287733-86354454 protein_coding
ENST00000375963 (ZCCHC6-001) 86287959-86354412 protein_coding
ENST00000469004 (ZCCHC6-007) 86323628-86324653 processed_transcript
ENSG00000135070 (ISCA1)
iron-sulfur cluster assembly 1
ENST00000311534 (ISCA1-002) 86265679-86282108 protein_coding
ENST00000326094 (ISCA1-003) 86266863-86282538 protein_coding
ENST00000375991 (ISCA1-001) 86264546-86282529 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_00007D_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044792-ENSMUSG00000035248 CGP 10090 13:59755409-59823147
GeneTranscriptPositionBiotype
ENSMUSG00000035248 (Zcchc6)
zinc finger, CCHC domain containing 6
ENSMUST00000071703 (Zcchc6-201) 59771879-59823147 protein_coding
ENSMUSG00000044792 (Isca1)
iron-sulfur cluster assembly 1 homolog (S. cerevisiae)
ENSMUST00000057115 (Isca1-001) 59755409-59769810 protein_coding
ENSMUST00000160628 (Isca1-002) 59760396-59769776 retained_intron
ENSMUSG00000089875 (Etohd2)
ethanol decreased 2
ENSMUST00000162450 (Etohd2-001) 59769966-59773680 processed_transcript
ENSMUST00000163053 (Etohd2-002) 59769965-59771939 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00007D_0001ENSDARG00000051956ENSDART00000073676ENSDARG00000074645ENSDART00000109487CIL_00007D_0002ENSG00000083223ENST00000277141ENST00000375947ENST00000375948ENST00000375957ENST00000375960ENST00000375963ENST00000469004ENSG00000135070ENST00000311534ENST00000326094ENST00000375991CIL_00007D_0003ENSMUSG00000035248ENSMUST00000071703ENSMUSG00000044792ENSMUST00000057115ENSMUST00000160628ENSMUSG00000089875ENSMUST00000162450ENSMUST00000163053
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00007D_0001ENSDARG00000051956ENSDART00000073676ENSDARG00000074645ENSDART00000109487CIL_00007D_0002ENSG00000083223ENST00000277141ENST00000375957ENST00000375960ENST00000375963ENSG00000135070ENST00000311534ENST00000375991CIL_00007D_0003ENSMUSG00000035248ENSMUST00000071703ENSMUSG00000044792ENSMUST00000057115ENSMUSG00000089875ENSMUST00000162450ENSMUST00000163053
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000051956 ENSDART00000073676 N/A N/A N/A 35.175±3.05 N/A N/A 29.592±7.44 8.947±8.36 3.334±0.00 N/A 17.183±0.00 N/A N/A N/A
ENSDARG00000074645 ENSDART00000109487 N/A N/A N/A 0.388±0.30 N/A N/A 1.704±0.00 N/A 0.679±0.00 N/A 0.609±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000083223 ENST00000277141 0.827±0.00 0.381±0.00 0.721±0.00 0.260±0.00 N/A 1.136±0.00 0.559±0.00 2.177±0.00 0.384±0.00 1.510±0.00 0.139±0.00 1.070±0.17 1.247±0.00 0.804±0.20
ENST00000375947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000375948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000375957 N/A 1.759±0.00 N/A 0.526±0.00 0.918±0.00 0.773±0.00 N/A 1.382±0.00 N/A N/A 0.719±0.40 6.660±3.52 2.877±2.04 1.972±0.72
ENST00000375960 N/A N/A 1.040±0.00 0.589±0.28 0.803±0.00 0.848±0.00 N/A 0.514±0.00 N/A N/A 0.814±0.49 N/A N/A N/A
ENST00000375963 2.082±0.00 1.146±0.00 N/A 0.808±0.20 2.063±0.25 0.863±0.02 1.273±0.00 1.997±0.98 0.978±0.00 1.016±0.00 1.715±0.00 1.849±0.45 1.033±0.03 2.550±0.82
ENST00000469004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135070 ENST00000311534 N/A N/A N/A N/A N/A N/A N/A 2.436±0.00 N/A N/A N/A 3.985±0.00 1.878±0.00 5.035±1.00
ENST00000326094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000375991 9.083±0.00 10.533±0.00 2.963±0.00 19.624±0.79 11.208±7.04 7.176±3.39 16.570±10.85 20.617±0.00 7.988±1.08 4.960±2.14 5.708±1.24 10.043±6.15 12.859±3.62 10.306±2.93
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035248 ENSMUST00000071703 5.813±3.47 3.751±0.35 5.190±0.03 9.963±0.84 5.201±2.01 6.135±2.59 2.750±0.90 4.810±1.87 10.773±4.69 6.347±1.54 1.998±1.56 6.341±1.81 7.304±4.76 5.024±0.49
ENSMUSG00000044792 ENSMUST00000057115 26.194±9.92 34.929±1.90 38.606±2.46 33.968±12.09 42.379±12.08 23.771±2.01 82.377±7.42 39.874±7.86 54.760±40.64 23.091±7.51 93.877±3.29 23.755±5.21 33.349±11.83 45.770±18.24
ENSMUST00000160628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000089875 ENSMUST00000162450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.395±0.17 N/A 3.365±0.87
ENSMUST00000163053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.601±0.30

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