C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline-rich coiled-coil 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376007 PRRC2A-001 ENSG00000204469 9606 + 6:31620720-31637771 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376007
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376007 41.444±0.00 26.144±0.00 2.269±0.00 20.814±18.07 13.346±7.50 10.617±7.52 10.661±8.44 12.609±10.51 7.833±0.00 15.651±14.55 21.539±17.55 26.147±31.17 17.459±9.83 87.766±19.82

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0016020 IDA membrane
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025253 Prrc2a-001 protein_coding Mus_musculus 0 8046
ENSMUST00000174805 Prrc2a-002 protein_coding Mus_musculus 0 7356
ENSMUST00000173558 Prrc2a-007 retained_intron Mus_musculus 0 953
ENSMUST00000172929 Prrc2a-004 processed_transcript Mus_musculus 0 704
ENSMUST00000172899 Prrc2a-006 retained_intron Mus_musculus 0 357

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