C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376753 FBXO6-001 ENSG00000116663 9606 + 1:11664124-11674354 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376753
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376753 3.134±0.00 2.996±0.00 1.145±0.69 1.953±1.78 2.392±0.00 1.342±1.07 1.255±0.49 1.840±1.71 3.276±3.05 1.919±1.28 5.273±3.17 2.687±0.72 4.148±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087H CIL_00087H_0001 VISTA 1:11580820-12184055
CIL_00022X CIL_00022X_0009 CGP 1:11654375-11674354

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000077 TAS DNA damage checkpoint
GO:0001948 ISS glycoprotein binding
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0006281 TAS DNA repair
GO:0006508 TAS proteolysis
GO:0006516 IEA glycoprotein catabolic process
GO:0006986 IEA response to unfolded protein
GO:0016567 IEA protein ubiquitination
GO:0019005 IDA SCF ubiquitin ligase complex
GO:0030246 IEA carbohydrate binding
GO:0030433 ISS ER-associated ubiquitin-dependent protein catabolic process
GO:0031146 IDA SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

Homologs

No Homologs available.

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