C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GDNF-inducible zinc finger protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377051 GZF1-201 ENSG00000125812 9606 + 20:23364384-23373045 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000377051
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000377051 1.161±0.00 3.225±0.00 3.125±0.96 0.882±0.00 0.626±0.00 0.423±0.16 2.610±1.46 1.342±0.00 0.897±0.00 2.128±0.00 2.258±0.30 1.476±0.33 6.087±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00023L CIL_00023L_0001 CGP 20:23350736-23373063
CIL_0004MO CIL_0004MO_0002 CGP 20:23362182-23421519

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000980 IDA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001206 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0005515 IEA protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0043565 IDA sequence-specific DNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028928 Gzf1-001 protein_coding Mus_musculus 0 1886
ENSMUST00000151362 Gzf1-003 processed_transcript Mus_musculus 0 706

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