C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Kruppel-like factor 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377669 KLF12-001 ENSG00000118922 9606 - 13:73686089-73995049 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000377669
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000377669 0.509±0.00 2.480±0.00 2.035±0.00 1.486±0.00 1.013±0.00 1.600±0.71 1.922±0.00 3.005±0.93 2.460±0.95 0.977±0.00 0.838±0.16 0.903±0.45 0.165±0.02 0.814±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051S CIL_00051S_0001 CGP 13:73054976-74133905

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000977 IEA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001227 IEA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0003714 TAS transcription corepressor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097079 Klf12-201 protein_coding Mus_musculus 0 1958
ENSMUST00000073312 Zfp760-201 protein_coding Mus_musculus 0.0007 53
ENSMUST00000179777 Gm19965-001 protein_coding Mus_musculus 0.0007 53
ENSMUST00000081742 Gm13154-001 protein_coding Mus_musculus 0.0007 53

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