C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spire-type actin nucleation factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378247 SPIRE2-001 ENSG00000204991 9606 + 16:89828508-89871319 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyOvaryPlacentaTestisENST00000378247
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Ovary Placenta Testis
ENST00000378247 0.368±0.00 0.619±0.00 2.568±0.88 0.340±0.00 3.252±0.00 0.109±0.00 1.118±0.00 0.690±0.11 4.593±0.58 0.872±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000069 CIL_000069_0001 CGP 16:89737549-89871319
CIL_00005J CIL_00005J_0001 CGP 16:89818179-89911384

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0005938 ISS cell cortex
GO:0015031 IEA protein transport
GO:0016192 ISS vesicle-mediated transport
GO:0030036 IMP actin cytoskeleton organization
GO:0030659 ISS cytoplasmic vesicle membrane
GO:0032154 ISS cleavage furrow
GO:0036089 ISS cleavage furrow formation
GO:0040038 ISS polar body extrusion after meiotic divisions
GO:0046907 ISS intracellular transport
GO:0051295 IMP establishment of meiotic spindle localization
GO:0070649 ISS formin-nucleated actin cable assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000010298 Spire2-201 protein_coding Mus_musculus 0 1982

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