C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat and EF-hand domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378392 ANKEF1-002 ENSG00000132623 9606 + 20:10035041-10055822 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000378392
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000378392 0.288±0.00 0.336±0.00 0.430±0.00 0.403±0.00 0.401±0.22 0.076±0.00 1.356±0.00 0.081±0.00 0.564±0.00 1.554±0.00 0.317±0.09 9.378±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00017Y CIL_00017Y_0001 CGP 20:9537389-10058303
CIL_0001ZQ CIL_0001ZQ_0002 CGP 20:9986126-10307418

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121717 Ankef1-001 protein_coding Mus_musculus 0 2163
ENSMUST00000028726 Ankef1-002 nonsense_mediated_decay Mus_musculus 0 2130
ENSMUST00000180246 Ankef1-201 protein_coding Mus_musculus 0 2126
ENSMUST00000149712 Ankef1-006 nonsense_mediated_decay Mus_musculus 0 1384
ENSMUST00000123214 Ankef1-005 protein_coding Mus_musculus 0 1177
ENSMUST00000138967 Ankef1-003 processed_transcript Mus_musculus 0 246
ENSMUST00000131970 Ankef1-004 processed_transcript Mus_musculus 5e-25 121

Loading