C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001ZQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000019135-ENSDARG00000020609 CGP 7955 20:34893541-34980838
GeneTranscriptPositionBiotype
ENSDARG00000019135 (ankef1a)
ankyrin repeat and EF-hand domain containing 1a 		ENSDART00000023655 (ankef1a-201) 34895125-34910710 protein_coding
ENSDART00000153006 (ankef1a-001) 34893541-34926813 protein_coding
ENSDARG00000020609 (snap25a)
synaptosome-associated protein 25a 		ENSDART00000007584 (snap25a-001) 34937677-34980838 protein_coding
ENSDART00000062738 (snap25a-002) 34957791-34980651 protein_coding
ENSDART00000137927 (snap25a-003) 34967979-34979868 processed_transcript
ENSDART00000153064 (snap25a-004) 34940553-34975936 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001ZQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132623-ENSG00000132639 CGP 9606 20:9986126-10307418
GeneTranscriptPositionBiotype
ENSG00000132623 (ANKEF1)
ankyrin repeat and EF-hand domain containing 1 		ENST00000378380 (ANKEF1-001) 10035049-10058303 protein_coding
ENST00000378392 (ANKEF1-002) 10035041-10055822 protein_coding
ENST00000437504 (ANKEF1-004) 9986126-10043216 processed_transcript
ENST00000488991 (ANKEF1-003) 10035117-10055827 processed_transcript
ENSG00000132639 (SNAP25)
synaptosomal-associated protein, 25kDa 		ENST00000254976 (SNAP25-003) 10218830-10307418 protein_coding
ENST00000304886 (SNAP25-004) 10218833-10307418 protein_coding
ENST00000430336 (SNAP25-002) 10219066-10293278 protein_coding
ENST00000492814 (SNAP25-001) 10275519-10278069 processed_transcript
ENST00000495883 (SNAP25-005) 10296230-10307418 processed_transcript
ENSG00000232448 (RP11-416N4.1)
 ENST00000458004 (RP11-416N4.1-001) 10180235-10185775 lincRNA
ENSG00000243961 (RP5-839B4.8)
 ENST00000449270 (RP5-839B4.8-001) 9986088-10007116 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0001ZQ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074771-ENSMUSG00000027273 CGP 10090 2:136501910-136782428
GeneTranscriptPositionBiotype
ENSMUSG00000027273 (Snap25)
synaptosomal-associated protein 25 		ENSMUST00000028727 (Snap25-001) 136713453-136782428 protein_coding
ENSMUST00000110098 (Snap25-002) 136713478-136781351 protein_coding
ENSMUST00000125486 (Snap25-003) 136713454-136762909 retained_intron
ENSMUSG00000074771 (Ankef1)
ankyrin repeat and EF-hand domain containing 1 		ENSMUST00000028726 (Ankef1-002) 136532212-136562091 nonsense_mediated_decay
ENSMUST00000121717 (Ankef1-001) 136532280-136555965 protein_coding
ENSMUST00000123214 (Ankef1-005) 136515519-136550131 protein_coding
ENSMUST00000131970 (Ankef1-004) 136552919-136553714 processed_transcript
ENSMUST00000138967 (Ankef1-003) 136552934-136555888 processed_transcript
ENSMUST00000149712 (Ankef1-006) 136501991-136551433 nonsense_mediated_decay
ENSMUST00000150189 (Ankef1-008) 136501955-136506747 processed_transcript
ENSMUST00000154343 (Ankef1-009) 136502181-136514214 processed_transcript
ENSMUST00000154394 (Ankef1-007) 136501910-136515515 processed_transcript
ENSMUST00000180246 (Ankef1-201) 136515515-136555828 protein_coding
ENSMUSG00000082849 (Gm14053)
predicted gene 14053 		ENSMUST00000121662 (Gm14053-001) 136744146-136744615 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ZQ_0001ENSDARG00000019135ENSDART00000023655ENSDART00000153006ENSDARG00000020609ENSDART00000007584ENSDART00000062738ENSDART00000137927ENSDART00000153064CIL_0001ZQ_0002ENSG00000132623ENST00000378380ENST00000378392ENST00000437504ENST00000488991ENSG00000132639ENST00000254976ENST00000304886ENST00000430336ENST00000492814ENST00000495883ENSG00000232448ENST00000458004ENSG00000243961ENST00000449270CIL_0001ZQ_0003ENSMUSG00000027273ENSMUST00000028727ENSMUST00000110098ENSMUST00000125486ENSMUSG00000074771ENSMUST00000028726ENSMUST00000121717ENSMUST00000123214ENSMUST00000131970ENSMUST00000138967ENSMUST00000149712ENSMUST00000150189ENSMUST00000154343ENSMUST00000154394ENSMUST00000180246ENSMUSG00000082849ENSMUST00000121662
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ZQ_0001ENSDARG00000019135ENSDART00000023655ENSDART00000153006ENSDARG00000020609ENSDART00000007584ENSDART00000062738ENSDART00000137927ENSDART00000153064CIL_0001ZQ_0002ENSG00000132623ENST00000378380ENST00000378392ENST00000488991ENSG00000132639ENST00000254976ENST00000304886ENST00000430336ENST00000492814ENST00000495883ENSG00000232448ENST00000458004ENSG00000243961ENST00000449270CIL_0001ZQ_0003ENSMUSG00000027273ENSMUST00000028727ENSMUST00000110098ENSMUST00000125486ENSMUSG00000074771ENSMUST00000028726ENSMUST00000121717ENSMUST00000123214ENSMUST00000138967ENSMUST00000149712ENSMUST00000150189ENSMUST00000154343ENSMUST00000154394ENSMUST00000180246ENSMUSG00000082849ENSMUST00000121662
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019135 ENSDART00000023655 N/A N/A N/A 0.112±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000153006 N/A N/A N/A 0.113±0.05 N/A N/A N/A 0.136±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000020609 ENSDART00000007584 N/A N/A N/A 1402.195±123.90 N/A N/A 0.466±0.17 0.152±0.00 0.474±0.00 N/A 39.855±0.00 N/A N/A N/A
ENSDART00000062738 N/A N/A N/A 1830.080±134.45 N/A N/A 0.393±0.21 1.041±0.06 N/A N/A N/A N/A N/A N/A
ENSDART00000137927 N/A N/A N/A N/A N/A N/A 0.707±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000153064 N/A N/A N/A N/A N/A N/A 0.553±0.00 N/A 0.345±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132623 ENST00000378380 0.531±0.00 N/A N/A 0.440±0.00 0.438±0.36 N/A 0.134±0.05 1.323±0.00 0.267±0.11 0.312±0.00 0.062±0.00 1.119±0.45 0.232±0.07 1.826±0.00
ENST00000378392 0.288±0.00 0.336±0.00 N/A 0.430±0.00 0.403±0.00 0.401±0.22 0.076±0.00 1.356±0.00 0.081±0.00 0.564±0.00 N/A 1.554±0.00 0.317±0.09 9.378±0.32
ENST00000437504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488991 N/A N/A 0.234±0.00 N/A 0.334±0.00 0.589±0.00 N/A N/A 0.154±0.00 N/A 0.158±0.00 1.078±0.67 0.321±0.25 7.233±4.40
ENSG00000132639 ENST00000254976 N/A 0.142±0.00 N/A 466.339±194.05 0.149±0.00 1.131±0.00 N/A 0.093±0.00 0.297±0.17 0.709±0.00 0.172±0.01 N/A 0.402±0.00 1.415±1.07
ENST00000304886 0.050±0.00 0.106±0.00 0.237±0.00 67.094±0.00 0.331±0.20 1.578±0.95 0.108±0.01 0.497±0.00 N/A 0.505±0.00 N/A 1.365±0.86 0.340±0.21 2.244±1.22
ENST00000430336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.377±0.00 0.045±0.00 N/A 0.905±0.00
ENST00000492814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.491±0.00 N/A N/A
ENST00000495883 0.037±0.00 N/A N/A N/A 0.236±0.16 N/A N/A 0.185±0.00 0.204±0.00 0.166±0.00 N/A 0.543±0.33 N/A 0.397±0.00
ENSG00000232448 ENST00000458004 N/A N/A 0.852±0.00 0.060±0.00 N/A N/A 0.105±0.00 N/A N/A N/A N/A 0.082±0.00 N/A 0.304±0.25
ENSG00000243961 ENST00000449270 0.564±0.00 N/A N/A N/A 1.247±0.00 N/A N/A N/A N/A 1.491±0.55 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027273 ENSMUST00000028727 0.044±0.02 8.532±2.90 0.464±0.06 220.916±270.56 0.145±0.05 1.622±0.28 0.464±0.08 0.160±0.06 0.074±0.09 0.077±0.03 0.021±0.00 0.101±0.05 0.021±0.00 0.046±0.03
ENSMUST00000110098 0.093±0.00 7.223±0.69 0.281±0.04 393.654±0.00 0.137±0.01 3.519±0.72 0.302±0.04 0.384±0.02 0.039±0.02 0.207±0.08 N/A 0.151±0.04 N/A 0.033±0.01
ENSMUST00000125486 N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A 0.008±0.00 0.002±0.00 N/A
ENSMUSG00000074771 ENSMUST00000028726 N/A 0.398±0.00 0.054±0.00 0.093±0.02 N/A 0.048±0.02 N/A 0.043±0.00 0.004±0.00 0.255±0.08 0.050±0.01 0.208±0.08 0.002±0.00 27.872±17.77
ENSMUST00000121717 N/A N/A N/A 0.028±0.00 N/A N/A 0.054±0.00 N/A 0.003±0.00 0.179±0.00 N/A 0.152±0.00 N/A 20.602±15.66
ENSMUST00000123214 N/A N/A N/A N/A N/A 0.051±0.00 0.198±0.00 0.141±0.00 N/A N/A 0.024±0.00 0.418±0.14 0.022±0.00 59.553±0.00
ENSMUST00000131970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138967 N/A N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 N/A N/A 0.588±0.00 N/A N/A
ENSMUST00000149712 N/A N/A N/A 0.035±0.00 N/A N/A N/A 0.084±0.00 0.005±0.00 N/A N/A N/A N/A N/A
ENSMUST00000150189 N/A N/A N/A N/A N/A 0.204±0.00 0.546±0.00 N/A 0.052±0.00 N/A 0.138±0.00 N/A N/A N/A
ENSMUST00000154343 N/A N/A 0.317±0.00 N/A N/A 0.176±0.00 0.278±0.11 0.476±0.00 N/A 0.229±0.00 0.142±0.11 0.730±0.27 N/A N/A
ENSMUST00000154394 14.742±8.47 1.950±0.70 0.411±0.16 N/A 6.242±2.13 0.171±0.11 0.348±0.13 0.526±0.18 N/A 0.575±0.26 0.129±0.12 1.157±0.67 0.362±0.00 N/A
ENSMUST00000180246 N/A N/A N/A N/A N/A N/A 0.073±0.01 0.110±0.00 0.006±0.00 N/A 0.052±0.03 N/A N/A N/A
ENSMUSG00000082849 ENSMUST00000121662 N/A N/A N/A 0.183±0.09 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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