C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378402 PKHD1L1-001 ENSG00000205038 9606 + 8:109362477-109530330 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378402
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378402 1.041±0.00 0.126±0.00 0.023±0.01 0.080±0.07 0.484±0.41 0.122±0.00 0.021±0.00 0.120±0.00 1.240±1.09 0.041±0.02 0.081±0.07 0.007±0.00 0.166±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060A CIL_00060A_0001 CGP 8:109334324-109530330
CIL_00060I CIL_00060I_0001 CGP 8:109362477-109565996

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 NAS receptor activity
GO:0005515 IEA protein binding
GO:0005615 NAS extracellular space
GO:0005829 TAS cytosol
GO:0006955 NAS immune response
GO:0016021 NAS integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038336 Pkhd1l1-201 protein_coding Mus_musculus 0 12270
ENSMUST00000166957 Pkhd1l1-202 protein_coding Mus_musculus 0 12260

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