C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00060A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000120533-ENSG00000205038 CGP 9606 8:109334324-109530330
GeneTranscriptPositionBiotype
ENSG00000120526 (NUDCD1)
NudC domain containing 1
ENST00000239690 (NUDCD1-001) 109240919-109334385 protein_coding
ENST00000427660 (NUDCD1-003) 109242675-109329934 protein_coding
ENST00000519607 (NUDCD1-002) 109242675-109334118 nonsense_mediated_decay
ENST00000521439 (NUDCD1-004) 109275415-109329892 nonsense_mediated_decay
ENSG00000205038 (PKHD1L1)
polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1
ENST00000378402 (PKHD1L1-001) 109362477-109530330 protein_coding
ENST00000526472 (PKHD1L1-002) 109480551-109530260 protein_coding
ENST00000533183 (PKHD1L1-003) 109497229-109499305 retained_intron
ENST00000534623 (PKHD1L1-004) 109522823-109527027 retained_intron
ENSG00000254185 (RP11-419L20.2)
ENST00000518703 (RP11-419L20.2-001) 109470131-109471117 processed_pseudogene
CIL_00060A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022338-ENSMUSG00000038725 CGP 10090 15:44428111-44597143
GeneTranscriptPositionBiotype
ENSMUSG00000022338 (Eny2)
enhancer of yellow 2 homolog (Drosophila)
ENSMUST00000060652 (Eny2-201) 44428111-44437685 protein_coding
ENSMUSG00000038725 (Pkhd1l1)
polycystic kidney and hepatic disease 1-like 1
ENSMUST00000038336 (Pkhd1l1-201) 44457553-44597137 protein_coding
ENSMUST00000166957 (Pkhd1l1-202) 44457553-44597143 protein_coding
ENSMUSG00000038736 (Nudcd1)
NudC domain containing 1
ENSMUST00000038719 (Nudcd1-201) 44375227-44428307 protein_coding
ENSMUSG00000094551 (Gm22392)
predicted gene, 22392
ENSMUST00000177971 (Gm22392-201) 44432595-44432701 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00060A_0001ENSG00000120526ENST00000239690ENST00000427660ENST00000519607ENST00000521439ENSG00000205038ENST00000378402ENST00000526472ENST00000533183ENST00000534623ENSG00000254185ENST00000518703CIL_00060A_0002ENSMUSG00000022338ENSMUST00000060652ENSMUSG00000038725ENSMUST00000038336ENSMUST00000166957ENSMUSG00000038736ENSMUST00000038719ENSMUSG00000094551ENSMUST00000177971
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00060A_0001ENSG00000120526ENST00000239690ENST00000427660ENST00000519607ENST00000521439ENSG00000205038ENST00000378402ENST00000526472ENST00000534623ENSG00000254185ENST00000518703CIL_00060A_0002ENSMUSG00000022338ENSMUST00000060652ENSMUSG00000038725ENSMUST00000038336ENSMUST00000166957ENSMUSG00000038736ENSMUST00000038719ENSMUSG00000094551ENSMUST00000177971
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120526 ENST00000239690 N/A N/A 0.931±0.00 1.629±0.18 2.107±0.00 1.575±0.00 0.447±0.00 1.240±0.23 1.577±0.00 2.323±0.08 N/A 2.701±1.03 1.983±0.08 2.383±0.00
ENST00000427660 N/A N/A N/A N/A 5.662±0.00 2.571±0.00 N/A N/A 2.145±0.00 N/A N/A 7.675±4.25 2.962±0.00 10.653±5.08
ENST00000519607 N/A N/A N/A N/A N/A 2.660±0.00 1.477±0.49 3.515±0.00 2.361±0.00 6.056±0.00 2.102±1.13 N/A N/A 4.346±0.00
ENST00000521439 N/A N/A 3.236±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205038 ENST00000378402 N/A 1.041±0.00 0.126±0.00 0.023±0.01 0.080±0.07 0.484±0.41 0.122±0.00 0.021±0.00 0.120±0.00 1.240±1.09 0.041±0.02 0.081±0.07 0.007±0.00 0.166±0.13
ENST00000526472 0.200±0.00 3.359±0.00 N/A 0.031±0.00 0.023±0.00 0.406±0.00 0.197±0.00 0.103±0.01 0.292±0.00 0.666±0.00 N/A 0.228±0.07 0.062±0.00 0.644±0.39
ENST00000533183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534623 N/A N/A N/A N/A N/A N/A N/A 0.291±0.00 N/A N/A 0.163±0.00 0.694±0.35 N/A N/A
ENSG00000254185 ENST00000518703 N/A 0.066±0.00 N/A N/A 0.093±0.00 N/A 0.053±0.00 N/A N/A N/A N/A N/A N/A 0.043±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022338 ENSMUST00000060652 4.287±1.39 2.330±0.26 9.449±0.45 20.960±7.17 2.912±0.77 3.163±1.07 4.056±0.46 7.580±1.49 8.074±3.60 5.545±0.74 6.013±0.73 5.780±4.13 11.614±2.47 2.555±0.58
ENSMUSG00000038725 ENSMUST00000038336 N/A 0.050±0.02 N/A 0.019±0.01 0.075±0.03 0.175±0.07 N/A 0.040±0.02 1.114±1.82 1.058±0.00 0.012±0.01 0.841±0.33 0.273±0.34 0.184±0.11
ENSMUST00000166957 0.317±0.00 0.050±0.02 N/A 0.006±0.00 0.085±0.05 0.130±0.00 N/A 0.015±0.01 0.012±0.00 0.509±0.00 0.011±0.01 0.531±0.17 0.008±0.01 0.063±0.02
ENSMUSG00000038736 ENSMUST00000038719 2.515±0.94 1.335±0.21 2.154±0.24 3.403±0.05 1.908±0.28 2.794±1.02 0.811±0.19 1.694±0.21 3.824±2.02 2.242±0.26 1.589±0.34 3.773±1.19 4.417±3.69 7.455±1.53
ENSMUSG00000094551 ENSMUST00000177971 N/A N/A N/A 36.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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