C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase C, beta 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378501 PLCB4-011 ENSG00000101333 9606 + 20:9307800-9481242 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartLiverLungOvaryTestisENST00000378501
Transcript ID Adipose Breast Colon Heart Liver Lung Ovary Testis
ENST00000378501 0.261±0.00 1.019±0.00 1.300±0.00 0.698±0.00 1.285±0.00 0.438±0.00 0.885±0.18 1.110±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PB CIL_0001PB_0001 CGP 20:8132177-9481242
CIL_00043I CIL_00043I_0001 CGP 20:9068763-9530524

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004435 IEA phosphatidylinositol phospholipase C activity
GO:0004629 TAS phospholipase C activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005790 IEA smooth endoplasmic reticulum
GO:0005829 TAS cytosol
GO:0006629 IEA lipid metabolic process
GO:0007165 IEA signal transduction
GO:0008081 IEA phosphoric diester hydrolase activity
GO:0014069 IEA postsynaptic density
GO:0016042 IEA lipid catabolic process
GO:0030425 IEA dendrite
GO:0035556 IEA intracellular signal transduction
GO:0043647 TAS inositol phosphate metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035646 Plcb4-201 protein_coding Mus_musculus 0 4665
ENSMUST00000110109 Plcb4-002 protein_coding Mus_musculus 0 4665
ENSMUST00000184371 Plcb4-007 nonsense_mediated_decay Mus_musculus 0 4080
ENSMUST00000134310 Plcb4-001 protein_coding Mus_musculus 0 2167
ENSMUST00000147744 Plcb4-003 protein_coding Mus_musculus 0 1214
ENSMUST00000127044 Plcb4-009 processed_transcript Mus_musculus 0 809
ENSMUST00000137969 Plcb4-006 retained_intron Mus_musculus 0 505
ENSMUST00000127729 Plcb4-014 processed_transcript Mus_musculus 0 315
ENSMUST00000150072 Plcb4-012 processed_transcript Mus_musculus 0 303
ENSMUST00000147122 Plcb4-013 processed_transcript Mus_musculus 0 211
ENSMUST00000146018 Plcb4-008 retained_intron Mus_musculus 2e-32 147

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