C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 1 open reading frame 86
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378546 C1orf86-008 ENSG00000162585 9606 - 1:2189548-2194774 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverMuscleOvaryENST00000378546
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Muscle Ovary
ENST00000378546 18.739±0.00 80.961±0.00 31.791±0.00 39.581±0.00 13.670±0.00 47.144±0.00 13.292±0.00 7.892±0.00 39.871±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QV CIL_0007QV_0001 VISTA 1:1910870-2513425

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005694 IDA chromosome
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0019985 IMP translesion synthesis
GO:0030054 IDA cell junction
GO:0031593 IDA polyubiquitin binding
GO:0036297 IMP interstrand cross-link repair
GO:0043130 IDA ubiquitin binding
GO:0043240 IDA Fanconi anaemia nuclear complex
GO:0046872 IEA metal ion binding
GO:0070530 IDA K63-linked polyubiquitin binding

Homologs

No Homologs available.

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