C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378825 CCDC3-002 ENSG00000151468 9606 - 10:12896625-13001697 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000378825
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000378825 28.091±0.00 54.600±0.00 7.039±0.00 12.837±0.00 55.037±48.47 17.001±0.00 8.065±0.00 5.936±0.93 29.839±0.00 56.923±37.93 22.927±3.47 53.815±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004RC CIL_0004RC_0002 CGP 10:12349482-13099652
CIL_0004RD CIL_0004RD_0002 CGP 10:12896625-13138308

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0005783 IDA endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027988 Ccdc3-001 protein_coding Mus_musculus 0 950
ENSDART00000036153 ccdc3-001 protein_coding Danio_rerio 0 261
ENSDART00000042221 zgc:110191-001 protein_coding Danio_rerio 0 215

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