C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LYR motif containing 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379380 LYRM7-001 ENSG00000186687 9606 + 5:131170810-131205426 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379380
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379380 1.413±0.00 0.856±0.00 1.021±0.00 5.058±0.78 2.302±0.88 2.236±0.00 4.037±1.78 1.901±1.53 1.527±0.35 0.559±0.00 2.093±0.08 1.016±0.74 0.846±0.37 3.631±0.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144164 Lyrm7-005 protein_coding Mus_musculus 0 353
ENSMUST00000148070 Lyrm7-001 nonsense_mediated_decay Mus_musculus 0 353
ENSMUST00000135853 Lyrm7-003 retained_intron Mus_musculus 0 195
ENSMUST00000141703 Lyrm7-002 nonsense_mediated_decay Mus_musculus 0 195
ENSMUST00000078259 Nsl1-001 protein_coding Mus_musculus 0.0000000000001 84

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