C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078259 Nsl1-001 ENSMUSG00000062510 10090 + 1:191063031-191084558 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078259
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078259 0.567±0.24 0.235±0.11 0.597±0.10 2.211±1.56 0.638±0.01 1.337±0.14 0.190±0.02 0.263±0.04 5.281±6.30 0.434±0.03 0.135±0.04 1.579±0.50 2.815±2.30 1.865±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JQ CIL_0008JQ_0002 VISTA 1:190939014-191541717

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000444 IEA MIS12/MIND type complex
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000176763 STK10-001 protein_coding Homo_sapiens 8e-16 92
ENST00000272748 KIAA1715-001 protein_coding Homo_sapiens 0.0000000001 75
ENST00000286760 WHAMM-001 protein_coding Homo_sapiens 0.0000000000004 82
ENST00000291358 IQCC-001 protein_coding Homo_sapiens 0.00000000003 75
ENST00000292478 PTCD1-001 protein_coding Homo_sapiens 0.00000000008 75
ENST00000295628 LRRC58-001 protein_coding Homo_sapiens 0.000000000002 81
ENST00000321945 FAM175A-001 protein_coding Homo_sapiens 0.00000000006 75
ENST00000324288 CIITA-001 protein_coding Homo_sapiens 0.00000000000002 88
ENST00000329627 PEX26-001 protein_coding Homo_sapiens 0.000000000006 81
ENST00000333219 ING1-001 protein_coding Homo_sapiens 0.0000000000001 84
ENST00000341695 PPA2-001 protein_coding Homo_sapiens 0.0000000003 71
ENST00000341761 WDR31-002 protein_coding Homo_sapiens 0.00000000007 75
ENST00000348706 PPA2-002 protein_coding Homo_sapiens 0.0000000003 71
ENST00000360121 SPN-201 protein_coding Homo_sapiens 0.0000000003 73
ENST00000369893 SFXN2-001 protein_coding Homo_sapiens 0.00000002 68
ENST00000373826 RAB42-001 protein_coding Homo_sapiens 0.000000001 69
ENST00000374193 WDR31-001 protein_coding Homo_sapiens 0.00000000007 75
ENST00000375664 WAC-016 protein_coding Homo_sapiens 0.000000000002 81
ENST00000379380 LYRM7-001 protein_coding Homo_sapiens 0.0000000000001 84
ENST00000380155 SYAP1-001 protein_coding Homo_sapiens 0.0000000003 73
ENST00000397333 DDX51-001 protein_coding Homo_sapiens 0.000000000000002 90
ENST00000398752 ATP5A1-001 protein_coding Homo_sapiens 0.000000000002 81
ENST00000426426 TMEM233-001 protein_coding Homo_sapiens 0.0000000000009 81
ENST00000458412 HYPK-004 protein_coding Homo_sapiens 0.0000000009 71
ENST00000462829 DDX51-006 retained_intron Homo_sapiens 0.000000000000001 90
ENST00000473202 SERPINE2-004 retained_intron Homo_sapiens 0.00000000000004 86
ENST00000474014 TACC2-025 retained_intron Homo_sapiens 0.0000000001 73
ENST00000474983 GCNT2-007 retained_intron Homo_sapiens 0.00000001 68
ENST00000493531 INTS1-005 processed_transcript Homo_sapiens 0.000000000000005 86
ENST00000495044 CCDC30-003 retained_intron Homo_sapiens 3e-16 92
ENST00000517360 STK10-004 retained_intron Homo_sapiens 3e-16 92
ENST00000537469 IQCC-002 protein_coding Homo_sapiens 0.00000000003 75
ENST00000544803 KIAA1715-201 protein_coding Homo_sapiens 0.0000000001 75
ENST00000554644 BTBD7-005 retained_intron Homo_sapiens 0.000000000000001 90
ENST00000561857 SPN-004 retained_intron Homo_sapiens 0.0000000001 73
ENST00000591316 CROCCP3-004 retained_intron Homo_sapiens 0.00000000000001 86
ENST00000600170 PLA2G4C-012 retained_intron Homo_sapiens 0.000001 58
ENST00000614987 RPS6KA5-001 protein_coding Homo_sapiens 0.000000000008 81
ENST00000617816 IQCC-003 retained_intron Homo_sapiens 0.00000000003 75

Loading