C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Kin17 DNA and RNA binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379562 KIN-001 ENSG00000151657 9606 - 10:7750962-7787981 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379562
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379562 0.246±0.00 0.411±0.00 0.379±0.00 0.603±0.00 0.623±0.31 0.448±0.28 0.342±0.00 0.630±0.07 0.290±0.00 0.092±0.00 0.636±0.08 0.241±0.09 0.752±0.19

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 TAS DNA binding
GO:0003690 ISS double-stranded DNA binding
GO:0003723 IDA RNA binding
GO:0005634 TAS nucleus
GO:0005737 IEA cytoplasm
GO:0006260 IDA DNA replication
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0006397 TAS mRNA processing
GO:0006974 IEP cellular response to DNA damage stimulus
GO:0016032 IEA viral process
GO:0016363 IDA nuclear matrix
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042512 Kin-001 protein_coding Mus_musculus 0 1408
ENSMUST00000178122 Gm20945-001 processed_pseudogene Mus_musculus 0 765
ENSMUST00000142599 Kin-002 processed_transcript Mus_musculus 0 355
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000000002 77
ENSMUST00000074912 2010012O05Rik-201 protein_coding Mus_musculus 0.00000000009 75

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