C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: speedy/RINGO cell cycle regulator family member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379579 SPDYA-001 ENSG00000163806 9606 + 2:28810819-28850611 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000379579
Transcript ID Testis
ENST00000379579 17.945±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013Q CIL_00013Q_0001 CGP 2:28457145-28802940
CIL_0007AT CIL_0007AT_0002 CGP 2:28782517-28870301

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 IDA G1/S transition of mitotic cell cycle
GO:0005634 IDA nucleus
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0007140 ISS male meiosis
GO:0007275 IEA multicellular organismal development
GO:0008284 IDA positive regulation of cell proliferation
GO:0019901 IPI protein kinase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167641 Spdya-201 protein_coding Mus_musculus 0 1142
ENSMUST00000064420 Spdya-001 protein_coding Mus_musculus 0 1122
ENSMUST00000144142 Spdya-002 protein_coding Mus_musculus 0 1077
ENSMUST00000124001 Spdya-003 protein_coding Mus_musculus 0 1029

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