C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007AT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059131-ENSDARG00000097465 CGP 7955 17:24637378-24648716
GeneTranscriptPositionBiotype
ENSDARG00000059131 (spdya)
speedy homolog A (Xenopus laevis) 		ENSDART00000082251 (spdya-001) 24637378-24643377 protein_coding
ENSDART00000130871 (spdya-201) 24637463-24643375 protein_coding
ENSDART00000135282 (spdya-003) 24637413-24638592 retained_intron
ENSDART00000135986 (spdya-005) 24637900-24641134 protein_coding
ENSDART00000141327 (spdya-004) 24637869-24640628 retained_intron
ENSDART00000147871 (spdya-002) 24637409-24640899 protein_coding
ENSDARG00000097465 (TRMT61B)
tRNA methyltransferase 61 homolog B (S. cerevisiae) 		ENSDART00000156606 (TRMT61B-001) 24642960-24648716 protein_coding
CIL_0007AT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163806-ENSG00000171103 CGP 9606 2:28782517-28870301
GeneTranscriptPositionBiotype
ENSG00000213639 (PPP1CB)
protein phosphatase 1, catalytic subunit, beta isozyme 		ENST00000296122 (PPP1CB-003) 28751814-28801648 protein_coding
ENST00000358506 (PPP1CB-201) 28751748-28802930 protein_coding
ENST00000395366 (PPP1CB-001) 28751853-28802940 protein_coding
ENST00000418910 (PPP1CB-009) 28779000-28781978 protein_coding
ENST00000420282 (PPP1CB-006) 28751676-28778999 protein_coding
ENST00000427786 (PPP1CB-008) 28751746-28778931 nonsense_mediated_decay
ENST00000441461 (PPP1CB-005) 28751739-28779039 protein_coding
ENST00000455580 (PPP1CB-004) 28751640-28783978 protein_coding
ENST00000464273 (PPP1CB-007) 28752011-28777261 retained_intron
ENSG00000273233 (RP11-713D19.1)
 ENST00000609581 (RP11-713D19.1-001) 28810281-28810706 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007AT_0001ENSDARG00000059131ENSDART00000082251ENSDART00000130871ENSDART00000135282ENSDART00000135986ENSDART00000141327ENSDART00000147871ENSDARG00000097465ENSDART00000156606CIL_0007AT_0002ENSG00000213639ENST00000296122ENST00000358506ENST00000395366ENST00000418910ENST00000420282ENST00000427786ENST00000441461ENST00000455580ENST00000464273ENSG00000273233ENST00000609581
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007AT_0001ENSDARG00000059131ENSDART00000082251ENSDART00000147871ENSDARG00000097465ENSDART00000156606CIL_0007AT_0002ENSG00000213639ENST00000296122ENST00000358506ENST00000395366ENSG00000273233ENST00000609581
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000059131 ENSDART00000082251 N/A N/A N/A N/A N/A N/A N/A 1.506±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000130871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147871 N/A N/A N/A N/A N/A N/A N/A 2.967±0.00 0.304±0.00 N/A N/A N/A N/A N/A
ENSDARG00000097465 ENSDART00000156606 N/A N/A N/A 2.450±0.74 N/A N/A 1.475±1.07 2.225±0.78 0.960±0.00 N/A 2.041±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000213639 ENST00000296122 34.901±0.00 11.961±0.00 9.889±0.00 29.893±5.89 30.808±0.10 45.878±6.78 34.456±1.83 27.574±12.46 37.531±30.03 36.456±2.12 59.227±43.69 34.554±14.45 19.557±15.35 39.490±9.60
ENST00000358506 N/A N/A N/A 9.199±0.00 N/A N/A N/A 5.505±0.50 3.302±0.00 10.245±0.00 N/A 22.782±0.00 6.443±0.48 N/A
ENST00000395366 22.762±0.00 22.206±0.00 3.975±0.00 18.586±0.00 18.547±13.22 19.934±9.52 17.015±8.31 17.011±0.00 16.882±14.36 13.238±5.54 29.851±18.47 11.791±6.60 3.659±1.55 26.774±0.00
ENST00000418910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000273233 ENST00000609581 N/A N/A N/A N/A N/A N/A N/A N/A 0.486±0.00 N/A N/A 0.175±0.00 0.338±0.00 0.490±0.22

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