C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EGF-like repeats and discoidin I-like domains 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380138 EDIL3-003 ENSG00000164176 9606 - 5:83940600-84384386 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380138
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380138 1.093±0.00 2.845±0.00 7.788±0.00 3.115±0.00 2.948±0.00 1.069±0.01 0.756±0.65 1.534±0.00 5.042±1.55 0.688±0.00 1.782±0.82 0.638±0.33 1.632±1.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TM CIL_0005TM_0002 CGP 5:83940554-86620962

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005178 TAS integrin binding
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0007155 IEA cell adhesion
GO:0007275 IEA multicellular organismal development
GO:0031982 IDA vesicle
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043111 Edil3-002 protein_coding Mus_musculus 0 1938
ENSMUST00000081769 Edil3-001 protein_coding Mus_musculus 0 1718
ENSMUST00000118731 Edil3-008 protein_coding Mus_musculus 0 1203
ENSMUST00000153974 Edil3-007 processed_transcript Mus_musculus 0 556
ENSMUST00000137921 Edil3-005 retained_intron Mus_musculus 0 394
ENSMUST00000140625 Edil3-006 retained_intron Mus_musculus 0 315

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