C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005TM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000093413-ENSDARG00000053382 CGP 7955 5:48273390-48698411
GeneTranscriptPositionBiotype
ENSDARG00000053382 (cox7c)
cytochrome c oxidase, subunit VIIc 		ENSDART00000075413 (cox7c-001) 48696789-48698411 protein_coding
ENSDARG00000093413 (edil3)
EGF-like repeats and discoidin I-like domains 3 		ENSDART00000133240 (edil3-001) 48273390-48507648 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005TM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164176-ENSG00000127184 CGP 9606 5:83940554-86620962
GeneTranscriptPositionBiotype
ENSG00000127184 (COX7C)
cytochrome c oxidase subunit VIIc 		ENST00000247655 (COX7C-001) 86617904-86620962 protein_coding
ENST00000505430 (COX7C-004) 86617941-86620766 processed_transcript
ENST00000509578 (COX7C-002) 86617956-86620761 protein_coding
ENST00000510447 (COX7C-003) 86618175-86620948 processed_transcript
ENST00000511472 (COX7C-005) 86617928-86620766 processed_transcript
ENST00000513124 (COX7C-007) 86617986-86620766 processed_transcript
ENST00000515763 (COX7C-006) 86617973-86620766 protein_coding
ENSG00000164176 (EDIL3)
EGF-like repeats and discoidin I-like domains 3 		ENST00000296591 (EDIL3-001) 83940554-84384793 protein_coding
ENST00000380138 (EDIL3-003) 83940600-84384386 protein_coding
ENST00000507663 (EDIL3-005) 84106660-84181242 processed_transcript
ENST00000510271 (EDIL3-002) 84047606-84078828 processed_transcript
ENSG00000205449 (NBPF22P)
neuroblastoma breakpoint family, member 22, pseudogene 		ENST00000508988 (NBPF22P-002) 86282766-86296309 transcribed_unprocessed_pseudogene
ENST00000590707 (NBPF22P-004) 86282460-86296463 processed_transcript
ENSG00000214853 (RP11-509M23.1)
 ENST00000425840 (RP11-509M23.1-001) 84999920-85000295 processed_pseudogene
ENSG00000215953 (AC026700.1)
 ENST00000401134 (AC026700.1-201) 85528044-85528134 miRNA
ENSG00000243859 (RPL5P17)
ribosomal protein L5 pseudogene 17 		ENST00000469685 (RPL5P17-001) 85464434-85465310 processed_pseudogene
ENSG00000248363 (CTC-261N6.1)
 ENST00000510946 (CTC-261N6.1-002) 86353803-86368853 lincRNA
ENST00000511940 (CTC-261N6.1-001) 86353803-86368854 lincRNA
ENSG00000249023 (CTD-2331D11.3)
 ENST00000505572 (CTD-2331D11.3-001) 85429702-85430184 lincRNA
ENSG00000249349 (CTC-384G19.1)
 ENST00000446516 (CTC-384G19.1-001) 85112342-85112756 lincRNA
ENSG00000249792 (RP11-1072N2.3)
 ENST00000510049 (RP11-1072N2.3-001) 85212958-85213614 lincRNA
ENSG00000249842 (CTD-2331D11.4)
 ENST00000511602 (CTD-2331D11.4-001) 85446974-85447758 lincRNA
ENSG00000250124 (CTC-261N6.2)
 ENST00000515706 (CTC-261N6.2-001) 86380660-86381426 lincRNA
ENSG00000250253 (RP11-1072N2.2)
 ENST00000507974 (RP11-1072N2.2-001) 85210060-85210903 processed_pseudogene
ENSG00000250359 (PTP4A1P4)
protein tyrosine phosphatase type IVA, member 1 pseudogene 4 		ENST00000512479 (PTP4A1P4-001) 86087526-86087847 processed_pseudogene
ENSG00000250874 (CTC-480C2.1)
 ENST00000507387 (CTC-480C2.1-001) 85663232-85664684 lincRNA
ENSG00000251066 (CTC-534B23.1)
 ENST00000512074 (CTC-534B23.1-001) 85549409-85549952 processed_pseudogene
ENSG00000251585 (CTD-2299E8.1)
 ENST00000502592 (CTD-2299E8.1-001) 86402465-86402960 processed_pseudogene
ENSG00000280009 (CTD-2123J17.2)
 ENST00000624021 (CTD-2123J17.2-001) 86305233-86306149 TEC

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TM_0001ENSDARG00000053382ENSDART00000075413ENSDARG00000093413ENSDART00000133240CIL_0005TM_0002ENSG00000127184ENST00000247655ENST00000505430ENST00000509578ENST00000510447ENST00000511472ENST00000513124ENST00000515763ENSG00000164176ENST00000296591ENST00000380138ENST00000507663ENST00000510271ENSG00000205449ENST00000508988ENST00000590707ENSG00000214853ENST00000425840ENSG00000215953ENST00000401134ENSG00000243859ENST00000469685ENSG00000248363ENST00000510946ENST00000511940ENSG00000249023ENST00000505572ENSG00000249349ENST00000446516ENSG00000249792ENST00000510049ENSG00000249842ENST00000511602ENSG00000250124ENST00000515706ENSG00000250253ENST00000507974ENSG00000250359ENST00000512479ENSG00000250874ENST00000507387ENSG00000251066ENST00000512074ENSG00000251585ENST00000502592ENSG00000280009ENST00000624021
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TM_0001ENSDARG00000053382ENSDART00000075413ENSDARG00000093413ENSDART00000133240CIL_0005TM_0002ENSG00000127184ENST00000247655ENST00000511472ENST00000515763ENSG00000164176ENST00000296591ENST00000380138ENSG00000205449ENST00000508988ENST00000590707ENSG00000214853ENST00000425840ENSG00000215953ENST00000401134ENSG00000243859ENST00000469685ENSG00000248363ENST00000510946ENSG00000249023ENST00000505572ENSG00000249349ENST00000446516ENSG00000249792ENST00000510049ENSG00000249842ENST00000511602ENSG00000250124ENST00000515706ENSG00000250253ENST00000507974ENSG00000250359ENST00000512479ENSG00000250874ENST00000507387ENSG00000251066ENST00000512074ENSG00000251585ENST00000502592ENSG00000280009ENST00000624021
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000053382 ENSDART00000075413 N/A N/A N/A 215.064±203.51 N/A N/A 920.894±180.11 112.524±107.06 21.187±0.00 N/A 475.388±0.00 N/A N/A N/A
ENSDARG00000093413 ENSDART00000133240 N/A N/A N/A N/A N/A N/A 1.281±0.28 N/A 0.060±0.00 N/A 3.044±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000127184 ENST00000247655 N/A N/A 24.472±0.00 147.622±0.00 34.555±0.00 64.615±0.00 117.236±0.00 51.497±0.00 46.765±0.00 32.665±0.00 171.167±0.00 105.602±79.26 72.388±8.13 N/A
ENST00000505430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511472 152.595±0.00 206.766±0.00 28.792±0.00 121.098±30.68 98.169±63.83 155.428±99.60 346.380±0.00 117.435±60.96 82.551±39.94 77.994±56.43 143.729±12.35 109.905±75.17 75.417±19.85 139.157±87.44
ENST00000513124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515763 90.039±0.00 173.249±0.00 N/A 220.574±0.00 145.896±0.00 227.791±0.00 446.201±0.00 260.687±0.00 192.572±0.00 220.382±0.00 224.123±0.00 197.781±51.09 148.925±29.03 155.541±36.54
ENSG00000164176 ENST00000296591 3.012±0.00 3.388±0.00 N/A 55.560±37.82 2.092±1.45 8.848±5.53 2.011±1.68 5.235±0.00 1.471±1.41 8.810±7.09 0.173±0.00 2.362±0.04 0.722±0.42 3.310±3.11
ENST00000380138 1.093±0.00 2.845±0.00 N/A 7.788±0.00 3.115±0.00 2.948±0.00 1.069±0.01 0.756±0.65 1.534±0.00 5.042±1.55 0.688±0.00 1.782±0.82 0.638±0.33 1.632±1.25
ENST00000507663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205449 ENST00000508988 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 N/A N/A N/A 0.261±0.05
ENST00000590707 N/A N/A 0.266±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A 0.806±0.19
ENSG00000214853 ENST00000425840 0.078±0.00 0.408±0.00 N/A 0.043±0.00 0.654±0.00 0.151±0.00 N/A 0.041±0.00 N/A 0.075±0.00 0.175±0.00 N/A N/A 0.037±0.00
ENSG00000215953 ENST00000401134 N/A 0.424±0.00 N/A N/A 1.146±0.00 N/A N/A N/A N/A N/A N/A 19.737±0.00 N/A 0.191±0.00
ENSG00000243859 ENST00000469685 0.064±0.00 0.040±0.00 0.057±0.00 0.013±0.00 0.051±0.00 0.084±0.00 0.012±0.00 0.013±0.00 0.059±0.00 0.012±0.00 0.047±0.00 0.015±0.00 N/A 0.060±0.02
ENSG00000248363 ENST00000510946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.00
ENST00000511940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249023 ENST00000505572 0.198±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.00
ENSG00000249349 ENST00000446516 0.428±0.00 0.724±0.00 N/A 0.903±0.00 0.516±0.00 0.176±0.00 0.116±0.00 0.233±0.00 0.034±0.00 0.166±0.00 0.106±0.00 0.136±0.08 N/A 0.230±0.12
ENSG00000249792 ENST00000510049 N/A 0.022±0.00 N/A 0.101±0.00 N/A N/A 0.118±0.07 0.061±0.00 0.009±0.00 0.008±0.00 0.070±0.00 0.026±0.00 N/A N/A
ENSG00000249842 ENST00000511602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.100±0.02
ENSG00000250124 ENST00000515706 N/A N/A N/A N/A N/A 0.009±0.00 0.010±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000250253 ENST00000507974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.021±0.00
ENSG00000250359 ENST00000512479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A N/A
ENSG00000250874 ENST00000507387 N/A 0.063±0.00 N/A 0.019±0.00 N/A 0.016±0.00 N/A N/A 0.016±0.00 0.057±0.00 N/A 0.020±0.01 0.035±0.01 0.064±0.05
ENSG00000251066 ENST00000512074 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.117±0.09 0.022±0.00 0.033±0.00
ENSG00000251585 ENST00000502592 N/A N/A N/A N/A N/A N/A 0.191±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000280009 ENST00000624021 N/A N/A 0.651±0.00 0.008±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.020±0.01

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