C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: elastin microfibril interfacer 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380320 EMILIN1-001 ENSG00000138080 9606 + 2:27078567-27086408 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380320
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380320 15.138±0.00 52.814±0.00 2.321±0.00 0.781±0.68 11.211±5.06 34.697±32.79 4.098±3.11 16.713±15.55 7.368±2.80 17.058±15.66 1.941±1.58 111.658±139.15 28.541±12.17 33.514±28.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00004E CIL_00004E_0001 CGP 2:27070472-27086408
CIL_0000EL CIL_0000EL_0001 CGP 2:27078567-27100772

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005576 TAS extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005581 IEA collagen trimer
GO:0007155 IEA cell adhesion
GO:0010811 IEA positive regulation of cell-substrate adhesion
GO:0030023 IEA extracellular matrix constituent conferring elasticity
GO:0030198 TAS extracellular matrix organization
GO:0031012 IDA extracellular matrix
GO:0042802 IEA identical protein binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031055 Emilin1-001 protein_coding Mus_musculus 0 3149
ENSMUST00000166839 Emilin1-002 retained_intron Mus_musculus 0 1736

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