C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380822 TAF9-001 ENSG00000085231 9606 - 5:69350984-69369542 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleOvaryENST00000380822
Transcript ID Brain Heart Liver Muscle Ovary
ENST00000380822 3.834±0.00 1.738±0.00 2.680±0.00 1.024±0.00 1.630±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004017 IDA adenylate kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005654 IDA nucleoplasm
GO:0006200 IEA ATP catabolic process
GO:0015030 IDA Cajal body
GO:0016020 IDA membrane
GO:0016887 IEA ATPase activity
GO:0046939 IEA nucleotide phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022135 Ak6-001 protein_coding Mus_musculus 0 582
ENSMUST00000084721 Ak6-201 protein_coding Mus_musculus 4e-39 167
ENSMUST00000190729 Ak6-002 protein_coding Mus_musculus 4e-39 167
ENSMUST00000185901 Ak6-003 retained_intron Mus_musculus 4e-39 167
ENSMUST00000190210 Ak6-004 retained_intron Mus_musculus 5e-28 130
ENSMUST00000167256 Taf9-201 protein_coding Mus_musculus 5e-28 130
ENSMUST00000190594 Taf9-001 protein_coding Mus_musculus 5e-28 130
ENSMUST00000187792 Taf9-004 protein_coding Mus_musculus 5e-28 130
ENSMUST00000185767 Taf9-003 protein_coding Mus_musculus 5e-28 130
ENSMUST00000190165 Taf9-002 protein_coding Mus_musculus 5e-28 130

Loading