C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381007 SGTB-001 ENSG00000197860 9606 - 5:65665928-65722130 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000381007
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000381007 2.761±0.00 2.832±0.00 0.235±0.00 15.389±0.37 1.803±0.08 1.899±1.04 0.923±0.35 1.534±1.02 1.181±0.56 2.543±0.17 0.360±0.23 1.396±0.43 0.788±0.24 1.318±0.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GA CIL_0007GA_0002 CGP 5:65665928-65871725

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044385 Sgtb-001 protein_coding Mus_musculus 0 1199
ENSMUST00000159574 Sgtb-003 protein_coding Mus_musculus 0 773
ENSMUST00000160322 Sgtb-002 protein_coding Mus_musculus 0 623
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000002 64
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000008 58

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