C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381151 SLC5A3-001 ENSG00000198743 9606 + 21:34073570-34106260 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000381151
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000381151 5.018±0.00 0.844±0.00 25.736±0.00 2.268±1.13 6.340±2.13 4.766±2.10 0.808±0.19 4.237±0.00 3.565±2.46 4.101±3.08 0.449±0.03 2.534±2.17 2.377±1.03 3.939±1.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000789 CIL_000789_0001 CGP 21:34073224-34143034
CIL_000788 CIL_000788_0001 CGP 21:34073570-34371389

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005367 TAS myo-inositol:sodium symporter activity
GO:0005524 IEA ATP binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006020 IEA inositol metabolic process
GO:0006810 TAS:IEA transport
GO:0006814 IEA sodium ion transport
GO:0007422 IEA peripheral nervous system development
GO:0015798 IEA myo-inositol transport
GO:0016020 IEA membrane
GO:0016021 TAS:IEA integral component of membrane
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0043576 IEA regulation of respiratory gaseous exchange
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113975 Slc5a3-001 protein_coding Mus_musculus 0 3701
ENSMUST00000131098 Slc5a3-002 protein_coding Mus_musculus 0 636

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