C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+/K+ transporting, nongastric, alpha polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381946 ATP12A-001 ENSG00000075673 9606 + 13:24680577-24712493 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainKidneyLungOvaryPlacentaTestisENST00000381946
Transcript ID Adrenal Bladder Brain Kidney Lung Ovary Placenta Testis
ENST00000381946 0.019±0.00 0.125±0.00 0.106±0.00 1.733±0.00 2.357±0.00 0.098±0.00 0.569±0.21 0.072±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MG CIL_0004MG_0001 CGP 13:24680411-24879921

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005391 IEA sodium:potassium-exchanging ATPase activity
GO:0005524 IEA ATP binding
GO:0005886 TAS plasma membrane
GO:0005889 TAS hydrogen:potassium-exchanging ATPase complex
GO:0006754 IEA ATP biosynthetic process
GO:0006813 IEA potassium ion transport
GO:0006814 IEA sodium ion transport
GO:0008900 IEA hydrogen:potassium-exchanging ATPase activity
GO:0016021 IEA integral component of membrane
GO:0034220 TAS ion transmembrane transport
GO:0046872 IEA metal ion binding
GO:0055085 TAS transmembrane transport
GO:1902600 IEA hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007340 Atp12a-201 protein_coding Mus_musculus 0 3197
ENSMUST00000111243 Atp1a4-001 protein_coding Mus_musculus 0 333
ENSMUST00000146595 Atp1a3-003 retained_intron Mus_musculus 0 285
ENSMUST00000080882 Atp1a3-001 protein_coding Mus_musculus 0 285
ENSMUST00000102858 Atp1a3-002 protein_coding Mus_musculus 0 285

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