C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain adjacent to zinc finger domain, 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382422 BAZ1A-001 ENSG00000198604 9606 - 14:34752732-34874932 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000382422
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000382422 6.659±0.00 7.838±0.00 0.140±0.00 0.963±0.60 2.287±0.57 2.406±1.10 1.768±0.00 1.971±0.99 1.770±0.00 13.234±0.00 2.051±0.00 5.614±5.84 2.400±1.10 11.413±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RD CIL_0005RD_0002 CGP 14:34706769-34875647

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0006261 IDA DNA-dependent DNA replication
GO:0006338 TAS chromatin remodeling
GO:0006351 NAS transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0008623 IDA CHRAC
GO:0016590 TAS ACF complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173433 Baz1a-001 protein_coding Mus_musculus 0 5472
ENSMUST00000038926 Baz1a-201 protein_coding Mus_musculus 0 5465
ENSMUST00000172875 Baz1a-003 protein_coding Mus_musculus 0 689
ENSMUST00000173453 Baz1a-007 retained_intron Mus_musculus 0 497
ENSMUST00000174225 Baz1a-005 nonsense_mediated_decay Mus_musculus 0 470
ENSMUST00000173177 Baz1a-006 protein_coding Mus_musculus 0 411
ENSMUST00000173529 Baz1a-002 protein_coding Mus_musculus 0 383
ENSMUST00000173176 Baz1a-004 nonsense_mediated_decay Mus_musculus 0 261

Loading