C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ubiquitously transcribed tetratricopeptide repeat containing, Y-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382893 UTY-004 ENSG00000183878 9606 - Y:13396302-13479978 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungOvaryENST00000382893
Transcript ID Brain Lung Ovary
ENST00000382893 2.970±0.00 12.476±0.00 1.384±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021T CIL_00021T_0002 CGP Y:12904937-13480673

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0010468 IEA regulation of gene expression
GO:0046872 IEA metal ion binding
GO:0071557 IEA histone H3-K27 demethylation
GO:0071558 IEA histone demethylase activity (H3-K27 specific)

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000130978 Kdm6a-003 retained_intron Mus_musculus 0 749
ENSMUST00000052368 Kdm6a-002 protein_coding Mus_musculus 0 749
ENSMUST00000044484 Kdm6a-001 protein_coding Mus_musculus 0 749
ENSDART00000088469 kdm6a-201 protein_coding Danio_rerio 0 420
ENSDART00000144623 kdm6a-001 protein_coding Danio_rerio 0 420

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