C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell adhesion molecule 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000383699 CADM2-002 ENSG00000175161 9606 + 3:84958981-86074429 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLungMuscleOvaryPlacentaENST00000383699
Transcript ID Brain Breast Lung Muscle Ovary Placenta
ENST00000383699 11.782±6.30 0.141±0.00 0.063±0.00 0.074±0.04 0.019±0.00 0.007±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059Y CIL_00059Y_0002 CGP 3:81489699-86074429

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0007155 IEA cell adhesion
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0034329 TAS cell junction assembly
GO:0034332 TAS adherens junction organization
GO:0045202 IEA synapse
GO:0045216 TAS cell-cell junction organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114292 Cadm2-001 protein_coding Mus_musculus 0 4983
ENSMUST00000120898 Cadm2-002 protein_coding Mus_musculus 0 3013
ENSMUST00000120594 Cadm2-003 protein_coding Mus_musculus 0 1881
ENSMUST00000128168 Cadm2-004 protein_coding Mus_musculus 0 1234
ENSMUST00000141282 Cadm2-006 processed_transcript Mus_musculus 0 538
ENSMUST00000123266 Cadm2-005 protein_coding Mus_musculus 0 337
ENSDART00000090790 cadm2b-001 protein_coding Danio_rerio 0 198

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