C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00059Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074969-ENSDARG00000062633 CGP 7955 15:7350536-8225907
GeneTranscriptPositionBiotype
ENSDARG00000062633 (cadm2b)
cell adhesion molecule 2b 		ENSDART00000090790 (cadm2b-001) 8064815-8225907 protein_coding
ENSDARG00000074969 (GBE1 (2 of 2))
glucan (1,4-alpha-), branching enzyme 1 		ENSDART00000113599 (GBE1 (2 of 2)-201) 7350536-7494771 protein_coding
ENSDART00000150771 (GBE1 (2 of 2)-001) 7350547-7579237 protein_coding
ENSDARG00000097641 (si:dkey-39c10.2)
si:dkey-39c10.2 		ENSDART00000156896 (si:dkey-39c10.2-001) 7870456-7870597 lincRNA
CIL_00059Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114480-ENSG00000175161 CGP 9606 3:81489699-86074429
GeneTranscriptPositionBiotype
ENSG00000114480 (GBE1)
glucan (1,4-alpha-), branching enzyme 1 		ENST00000429644 (GBE1-001) 81489699-81762161 protein_coding
ENST00000477426 (GBE1-004) 81654579-81670982 processed_transcript
ENST00000484687 (GBE1-006) 81534667-81577943 retained_intron
ENST00000486920 (GBE1-005) 81648967-81650346 retained_intron
ENST00000489715 (GBE1-002) 81489933-81743629 protein_coding
ENST00000498468 (GBE1-008) 81642571-81649878 retained_intron
ENSG00000175161 (CADM2)
cell adhesion molecule 2 		ENST00000383699 (CADM2-002) 84958981-86074429 protein_coding
ENST00000405615 (CADM2-001) 85726482-86066783 protein_coding
ENST00000407528 (CADM2-006) 84959546-86066835 protein_coding
ENST00000473523 (CADM2-005) 84958989-84959636 processed_transcript
ENST00000485126 (CADM2-004) 84959005-84960438 processed_transcript
ENSG00000222389 (RNU2-28P)
RNA, U2 small nuclear 28, pseudogene 		ENST00000410457 (RNU2-28P-201) 81509476-81509664 snRNA
ENSG00000239440 (RP11-260O18.1)
 ENST00000470263 (RP11-260O18.1-001) 81986138-82463675 lincRNA
ENST00000494340 (RP11-260O18.1-002) 81986152-82202454 lincRNA
ENSG00000239519 (CADM2-AS1)
CADM2 antisense RNA 1 		ENST00000476021 (CADM2-AS1-001) 85992183-86028007 antisense
ENSG00000240404 (RP11-142L1.3)
 ENST00000477387 (RP11-142L1.3-001) 81612790-81613072 processed_pseudogene
ENSG00000241095 (CYP51A1P1)
cytochrome P450, family 51, subfamily A, polypeptide 1 pseudogene 1 		ENST00000492267 (CYP51A1P1-001) 82806515-82808021 processed_pseudogene
ENSG00000241319 (SETP6)
SET pseudogene 6 		ENST00000479329 (SETP6-001) 81612238-81612805 processed_pseudogene
ENSG00000241367 (RPL7AP23)
ribosomal protein L7a pseudogene 23 		ENST00000482625 (RPL7AP23-001) 82319172-82320279 processed_pseudogene
ENSG00000241648 (CADM2-AS2)
CADM2 antisense RNA 2 		ENST00000467225 (CADM2-AS2-001) 85799987-85828050 antisense
ENSG00000242009 (RP11-359D24.1)
 ENST00000471614 (RP11-359D24.1-001) 81840547-81922861 lincRNA
ENSG00000242190 (RP11-142L1.1)
 ENST00000497946 (RP11-142L1.1-001) 81762706-81764756 lincRNA
ENSG00000242195 (SRRM1P2)
serine/arginine repetitive matrix 1 pseudogene 2 		ENST00000464531 (SRRM1P2-001) 83937045-83938236 processed_pseudogene
ENSG00000242339 (RP11-735B13.2)
 ENST00000488348 (RP11-735B13.2-001) 84884936-84893379 lincRNA
ENSG00000243915 (PRKRIRP2)
protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) pseudogene 2 		ENST00000489193 (PRKRIRP2-001) 86012561-86015120 processed_pseudogene
ENSG00000266652 (AC107025.1)
 ENST00000578770 (AC107025.1-201) 84496576-84496663 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00059Y_0001ENSDARG00000062633ENSDART00000090790ENSDARG00000074969ENSDART00000113599ENSDART00000150771ENSDARG00000097641ENSDART00000156896CIL_00059Y_0002ENSG00000114480ENST00000429644ENST00000477426ENST00000484687ENST00000486920ENST00000489715ENST00000498468ENSG00000175161ENST00000383699ENST00000405615ENST00000407528ENST00000473523ENST00000485126ENSG00000222389ENST00000410457ENSG00000239440ENST00000470263ENST00000494340ENSG00000239519ENST00000476021ENSG00000240404ENST00000477387ENSG00000241095ENST00000492267ENSG00000241319ENST00000479329ENSG00000241367ENST00000482625ENSG00000241648ENST00000467225ENSG00000242009ENST00000471614ENSG00000242190ENST00000497946ENSG00000242195ENST00000464531ENSG00000242339ENST00000488348ENSG00000243915ENST00000489193ENSG00000266652ENST00000578770
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00059Y_0001ENSDARG00000062633ENSDART00000090790ENSDARG00000074969ENSDART00000113599ENSDART00000150771ENSDARG00000097641ENSDART00000156896CIL_00059Y_0002ENSG00000114480ENST00000429644ENST00000489715ENSG00000175161ENST00000383699ENST00000405615ENST00000407528ENST00000473523ENST00000485126ENSG00000222389ENST00000410457ENSG00000239440ENST00000470263ENST00000494340ENSG00000239519ENST00000476021ENSG00000240404ENST00000477387ENSG00000241095ENST00000492267ENSG00000241319ENST00000479329ENSG00000241367ENST00000482625ENSG00000241648ENST00000467225ENSG00000242009ENST00000471614ENSG00000242190ENST00000497946ENSG00000242195ENST00000464531ENSG00000242339ENST00000488348ENSG00000243915ENST00000489193ENSG00000266652ENST00000578770
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000062633 ENSDART00000090790 N/A N/A N/A 6.969±0.00 N/A N/A 0.175±0.00 N/A N/A N/A 1.430±0.00 N/A N/A N/A
ENSDARG00000074969 ENSDART00000113599 N/A N/A N/A 1.639±1.57 N/A N/A 4.551±0.84 4.693±0.00 2.445±0.00 N/A 2.579±0.00 N/A N/A N/A
ENSDART00000150771 N/A N/A N/A 2.059±0.03 N/A N/A 2.528±0.12 4.920±0.00 1.921±0.00 N/A 2.280±0.00 N/A N/A N/A
ENSDARG00000097641 ENSDART00000156896 N/A N/A N/A 35.348±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114480 ENST00000429644 15.736±0.00 2.823±0.00 2.460±0.00 1.475±0.80 19.163±0.00 5.582±3.56 5.105±1.66 8.379±1.86 5.165±1.59 6.211±2.02 10.232±4.34 4.999±3.28 5.009±1.75 4.234±2.21
ENST00000477426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489715 31.954±0.00 4.363±0.00 1.175±0.00 1.649±0.00 15.546±9.29 6.288±3.38 6.028±0.58 8.730±1.78 5.288±0.07 6.755±0.00 9.991±7.61 2.256±0.72 3.134±1.00 1.680±1.22
ENST00000498468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175161 ENST00000383699 N/A N/A N/A 11.782±6.30 0.141±0.00 N/A N/A N/A N/A 0.063±0.00 0.074±0.04 0.019±0.00 0.007±0.00 N/A
ENST00000405615 N/A N/A N/A 24.573±0.00 1.672±0.00 N/A N/A N/A 1.109±0.00 0.649±0.00 1.245±0.00 0.210±0.13 0.048±0.01 0.097±0.00
ENST00000407528 N/A N/A N/A N/A N/A 0.785±0.00 0.321±0.00 0.478±0.00 N/A N/A N/A N/A N/A N/A
ENST00000473523 N/A N/A N/A N/A N/A N/A 0.894±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000485126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.302±0.00 N/A N/A 1.221±0.00
ENSG00000222389 ENST00000410457 0.175±0.00 N/A 1.823±0.00 N/A 0.095±0.00 N/A N/A 0.049±0.00 0.126±0.00 N/A N/A N/A N/A N/A
ENSG00000239440 ENST00000470263 N/A 0.012±0.00 N/A 0.084±0.00 N/A N/A N/A 0.006±0.00 0.005±0.00 N/A N/A N/A N/A 0.095±0.09
ENST00000494340 N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.167±0.15
ENSG00000239519 ENST00000476021 0.073±0.00 0.032±0.00 N/A 0.181±0.00 0.050±0.00 0.037±0.01 0.003±0.00 N/A 0.046±0.00 0.018±0.00 N/A 0.007±0.00 N/A 0.012±0.00
ENSG00000240404 ENST00000477387 N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A 0.039±0.00 0.147±0.12 N/A N/A
ENSG00000241095 ENST00000492267 0.047±0.00 N/A N/A 0.037±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.00
ENSG00000241319 ENST00000479329 0.038±0.00 0.019±0.00 N/A 0.082±0.04 0.018±0.00 0.017±0.00 0.242±0.12 0.467±0.00 0.499±0.00 0.218±0.00 2.113±0.00 0.369±0.00 0.032±0.00 N/A
ENSG00000241367 ENST00000482625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A
ENSG00000241648 ENST00000467225 0.054±0.00 0.075±0.00 N/A 0.058±0.00 N/A N/A 0.104±0.00 N/A N/A N/A N/A 0.023±0.00 N/A 0.071±0.01
ENSG00000242009 ENST00000471614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.377±0.21
ENSG00000242190 ENST00000497946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.103±0.00 N/A 0.095±0.00
ENSG00000242195 ENST00000464531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00
ENSG00000242339 ENST00000488348 0.141±0.00 0.034±0.00 N/A 0.071±0.00 0.033±0.00 N/A 0.160±0.00 N/A 0.121±0.00 N/A N/A N/A N/A 0.111±0.00
ENSG00000243915 ENST00000489193 0.005±0.00 N/A N/A 0.187±0.12 N/A 0.037±0.03 N/A N/A N/A N/A 0.123±0.12 N/A N/A 0.008±0.00
ENSG00000266652 ENST00000578770 N/A N/A N/A 0.499±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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