C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: immunoglobulin heavy variable 3-49
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000390625 IGHV3-49-001 ENSG00000211965 9606 - 14:106556936-106557477 IG_V_gene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000390625
Transcript ID Adipose Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000390625 0.490±0.00 4.958±1.61 2.312±1.68 0.684±0.00 0.411±0.00 0.363±0.00 3.101±1.76 0.266±0.05 0.349±0.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103459 Ighv5-17-201 IG_LV_gene Mus_musculus 0 244
ENSMUST00000103489 Ighv6-6-201 IG_LV_gene Mus_musculus 0 209
ENSMUST00000103444 Ighv5-4-201 IG_LV_gene Mus_musculus 0 193
ENSMUST00000103486 Ighv6-3-201 IG_LV_gene Mus_musculus 2.8026e-45 185
ENSMUST00000103446 Ighv5-6-201 IG_LV_gene Mus_musculus 1.99993e-41 172
ENSMUST00000179796 Ighv6-5-201 protein_coding Mus_musculus 4e-33 145
ENSMUST00000177949 Ighv6-4-201 protein_coding Mus_musculus 2e-31 139
ENSMUST00000103442 Ighv5-2-201 IG_LV_gene Mus_musculus 1e-23 113

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