C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: immunoglobulin heavy variable 5-4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103444 Ighv5-4-201 ENSMUSG00000095612 10090 - 12:113597446-113597905 IG_LV_gene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMusclePlacentaENSMUST00000103444
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Placenta
ENSMUST00000103444 0.259±0.08 0.343±0.01 0.045±0.00 0.226±0.00 2.556±1.39 6.931±2.40 0.262±0.07 0.316±0.01 0.697±0.21 1.275±0.36 0.203±0.00 0.053±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000390598 IGHV3-7-001 IG_V_gene Homo_sapiens 0 305
ENST00000390601 IGHV3-11-001 IG_V_gene Homo_sapiens 0 337
ENST00000390602 IGHV3-13-001 IG_V_gene Homo_sapiens 0 315
ENST00000390603 IGHV3-15-001 IG_V_gene Homo_sapiens 0 250
ENST00000390604 IGHV3-16-001 IG_V_gene Homo_sapiens 0 219
ENST00000390606 IGHV3-20-001 IG_V_gene Homo_sapiens 0 298
ENST00000390607 IGHV3-21-001 IG_V_gene Homo_sapiens 0 339
ENST00000390609 IGHV3-23-001 IG_V_gene Homo_sapiens 0 331
ENST00000390615 IGHV3-33-001 IG_V_gene Homo_sapiens 0 316
ENST00000390617 IGHV3-35-001 IG_V_gene Homo_sapiens 0 252
ENST00000390618 IGHV3-38-001 IG_V_gene Homo_sapiens 0 307
ENST00000390621 IGHV1-45-001 IG_V_gene Homo_sapiens 0.00000004 62
ENST00000390624 IGHV3-48-001 IG_V_gene Homo_sapiens 0 331
ENST00000390625 IGHV3-49-001 IG_V_gene Homo_sapiens 0 193
ENST00000390627 IGHV3-53-001 IG_V_gene Homo_sapiens 0 289
ENST00000390632 IGHV3-66-001 IG_V_gene Homo_sapiens 0 296
ENST00000390636 IGHV3-73-001 IG_V_gene Homo_sapiens 0 226
ENST00000424969 IGHV3-74-001 IG_V_gene Homo_sapiens 0 303
ENST00000425181 IGHV3OR16-10-001 IG_V_gene Homo_sapiens 0 296
ENST00000426099 RP11-1166P10.8-001 unprocessed_pseudogene Homo_sapiens 0 279
ENST00000429316 AC103563.5-001 unprocessed_pseudogene Homo_sapiens 6e-16 86
ENST00000433072 IGHV3-72-001 IG_V_gene Homo_sapiens 0 239
ENST00000434710 IGHV3-43-001 IG_V_gene Homo_sapiens 0 303
ENST00000518224 IGHV3-25-001 IG_V_pseudogene Homo_sapiens 2e-40 169
ENST00000520057 IGHV3-62-001 IG_V_pseudogene Homo_sapiens 0 244
ENST00000520721 IGHV3-22-001 IG_V_pseudogene Homo_sapiens 9.94922e-44 180
ENST00000521488 IGHV3-19-001 IG_V_pseudogene Homo_sapiens 0 213
ENST00000521678 IGHV3-60-001 IG_V_pseudogene Homo_sapiens 0 263
ENST00000523210 IGHV3-65-001 IG_V_pseudogene Homo_sapiens 4e-37 158
ENST00000558565 IGHV3OR15-7-001 IG_V_gene Homo_sapiens 5.99994e-41 171
ENST00000562905 IGHV3OR16-13-001 IG_V_gene Homo_sapiens 0 287
ENST00000563488 RP11-170L3.7-001 processed_pseudogene Homo_sapiens 0 193
ENST00000563644 IGHV3OR16-16-001 unprocessed_pseudogene Homo_sapiens 0 202
ENST00000565407 IGHV3OR16-8-001 IG_V_gene Homo_sapiens 0 263
ENST00000565463 IGHV3OR16-15-001 IG_V_pseudogene Homo_sapiens 2.94273e-44 182
ENST00000565524 IGHV3OR16-11-001 IG_V_pseudogene Homo_sapiens 0 302
ENST00000568775 IGHV3OR16-6-001 IG_V_pseudogene Homo_sapiens 5.99994e-41 171
ENST00000569103 RP11-812E19.9-001 protein_coding Homo_sapiens 0 252
ENST00000603660 IGHV3-30-001 IG_V_gene Homo_sapiens 0 320
ENST00000604106 IGHV3OR16-7-001 IG_V_pseudogene Homo_sapiens 3e-38 161
ENST00000611989 AC245369.1-201 protein_coding Homo_sapiens 6e-29 130
ENST00000612243 AC136616.2-201 protein_coding Homo_sapiens 2e-40 169
ENST00000612246 IGHG1-209 protein_coding Homo_sapiens 0 307
ENST00000613121 IGHV3-41-001 IG_V_pseudogene Homo_sapiens 0 270
ENST00000613152 IGHG1-202 IG_C_gene Homo_sapiens 0 307
ENST00000613158 IGHG1-210 protein_coding Homo_sapiens 0 287
ENST00000613477 IGHV3-49-201 IG_V_gene Homo_sapiens 2e-35 152
ENST00000613516 IGHM-202 IG_C_gene Homo_sapiens 0 337
ENST00000614109 AC244452.3-201 protein_coding Homo_sapiens 2e-35 152
ENST00000614110 AC136616.2-202 protein_coding Homo_sapiens 1e-26 122
ENST00000614315 AC245023.4-201 protein_coding Homo_sapiens 2e-39 165
ENST00000615655 IGHG1-211 protein_coding Homo_sapiens 0 337
ENST00000615782 IGHG1-212 protein_coding Homo_sapiens 0 307
ENST00000615784 AC244452.2-201 protein_coding Homo_sapiens 0.00000004 62
ENST00000615822 IGHG1-203 IG_C_gene Homo_sapiens 0 309
ENST00000616331 IGHG1-213 protein_coding Homo_sapiens 0 309
ENST00000618085 IGHV3-64-201 IG_V_gene Homo_sapiens 6e-29 130
ENST00000618756 IGHG1-205 IG_C_gene Homo_sapiens 0 296
ENST00000619212 IGHG1-206 IG_C_gene Homo_sapiens 0 287
ENST00000619729 AC233755.2-201 protein_coding Homo_sapiens 0 241
ENST00000621503 IGHV3-72-201 IG_V_gene Homo_sapiens 2e-39 165

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