C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor-like 4C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000390645 ARL4C-001 ENSG00000188042 9606 - 2:234493041-234497053 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000390645
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000390645 5.283±0.00 10.406±0.00 0.924±0.00 8.814±2.80 4.457±1.44 2.530±0.00 1.100±0.78 1.551±0.65 1.710±0.28 8.178±4.38 0.490±0.00 4.048±1.89 7.533±2.19 1.005±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004RR CIL_0004RR_0002 CGP 2:234493041-235055714

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 TAS:IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 TAS nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006184 TAS GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0032456 IDA endocytic recycling
GO:0042995 IEA cell projection
GO:0043014 IDA alpha-tubulin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159814 Arl4c-001 protein_coding Mus_musculus 0 1306
ENSMUST00000187810 Arl4c-201 protein_coding Mus_musculus 0 1158
ENSMUST00000051236 Arl4c-002 nonsense_mediated_decay Mus_musculus 0 1158
ENSDART00000046423 arl4cb-001 protein_coding Danio_rerio 0 377
ENSMUST00000121387 Gm15009-001 transcribed_processed_pseudogene Mus_musculus 0 296

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