C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan anchor biosynthesis, class X
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392391 PIGX-002 ENSG00000163964 9606 + 3:196712358-196736007 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000392391
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000392391 3.391±0.00 5.336±0.00 9.822±0.00 3.078±1.85 2.862±1.66 1.227±0.81 3.110±2.78 1.004±0.45 1.732±1.47 1.065±0.92 2.608±1.48 2.981±0.32 2.903±0.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003O8 CIL_0003O8_0002 CGP 3:196639775-196736007

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005789 IEA:TAS endoplasmic reticulum membrane
GO:0006501 TAS C-terminal protein lipidation
GO:0006506 IEA GPI anchor biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016254 TAS preassembly of GPI anchor in ER membrane
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000189013 Pigx-201 protein_coding Mus_musculus 0 717
ENSMUST00000155966 Pigx-002 protein_coding Mus_musculus 0 717
ENSMUST00000096109 Pigx-001 protein_coding Mus_musculus 0 695
ENSMUST00000135677 Pigx-005 retained_intron Mus_musculus 0 239
ENSMUST00000147688 Pigx-010 nonsense_mediated_decay Mus_musculus 0 237

Loading