C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell adhesion associated, oncogene regulated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392693 CDON-001 ENSG00000064309 9606 - 11:125955796-126063292 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryTestisENST00000392693
Transcript ID Adrenal Ovary Testis
ENST00000392693 1.072±0.00 3.058±0.00 0.659±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W7 CIL_0007W7_0001 VISTA 11:125757160-126360423

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001708 IEA cell fate specification
GO:0001934 IEA positive regulation of protein phosphorylation
GO:0002088 IEA lens development in camera-type eye
GO:0005515 IPI:IEA protein binding
GO:0005886 TAS plasma membrane
GO:0007155 TAS cell adhesion
GO:0007224 IEA smoothened signaling pathway
GO:0007520 IEA myoblast fusion
GO:0009952 IEA anterior/posterior pattern specification
GO:0010172 IEA embryonic body morphogenesis
GO:0014816 IEA skeletal muscle satellite cell differentiation
GO:0016021 IEA integral component of membrane
GO:0021987 IEA cerebral cortex development
GO:0031012 TAS extracellular matrix
GO:0042692 TAS muscle cell differentiation
GO:0043410 IEA positive regulation of MAPK cascade
GO:0043497 IEA regulation of protein heterodimerization activity
GO:0045664 IEA regulation of neuron differentiation
GO:0045666 IEA positive regulation of neuron differentiation
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0048598 IEA embryonic morphogenesis
GO:0048643 IEA positive regulation of skeletal muscle tissue development
GO:0051057 IEA positive regulation of small GTPase mediated signal transduction
GO:0051146 IEA striated muscle cell differentiation
GO:0051149 TAS positive regulation of muscle cell differentiation
GO:0060059 IEA embryonic retina morphogenesis in camera-type eye
GO:2000179 IEA positive regulation of neural precursor cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119129 Cdon-001 protein_coding Mus_musculus 0 3094
ENSMUST00000042842 Cdon-201 protein_coding Mus_musculus 0 3090
ENSMUST00000154652 Cdon-002 protein_coding Mus_musculus 0 1650
ENSMUST00000151682 Cdon-004 protein_coding Mus_musculus 0 516
ENSMUST00000127264 Cdon-005 protein_coding Mus_musculus 0 252
ENSMUST00000137200 Cdon-003 nonsense_mediated_decay Mus_musculus 0 230

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