C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393366 ATP5G1-003 ENSG00000159199 9606 + 17:48892817-48895869 protein_coding

Homo sapiens EnsemblGRCh38

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000393366
Transcript ID Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000393366 2.587±0.00 2.141±0.00 111.249±103.56 65.452±0.00 17.442±0.00 7.681±0.00 21.055±5.86 10.198±2.96 9.457±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZM CIL_0007ZM_0001 VISTA 17:48304888-48905406

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 NAS transporter activity
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0005753 ISS mitochondrial proton-transporting ATP synthase complex
GO:0008289 IEA lipid binding
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016021 IEA integral component of membrane
GO:0022904 TAS respiratory electron transport chain
GO:0033177 IEA proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0042776 TAS mitochondrial ATP synthesis coupled proton transport
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045263 IEA proton-transporting ATP synthase complex, coupling factor F(o)

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107684 Atp5g1-002 protein_coding Mus_musculus 0 632
ENSMUST00000178611 Atp5g1-201 protein_coding Mus_musculus 0 569
ENSMUST00000090541 Atp5g1-001 protein_coding Mus_musculus 0 566
ENSMUST00000107686 Atp5g1-003 protein_coding Mus_musculus 0 564
ENSMUST00000081241 Gm10039-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000119634 Gm12337-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000131499 Gm4660-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000170777 Gm6612-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000117586 Gm14299-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000178807 Gm4479-201 processed_pseudogene Mus_musculus 0 217
ENSMUST00000117052 Gm14050-001 processed_pseudogene Mus_musculus 2e-27 126

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